Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 RN7SKP92-201ENST00000517266 244 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.14□□□□□ -1.75
LMX1BO60663 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.14□□□□□ -1.75
LMX1BO60663 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.14□□□□□ -1.75
LMX1BO60663 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.14□□□□□ -1.75
LMX1BO60663 AL358913.1-201ENST00000554342 121 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.14□□□□□ -1.75
LMX1BO60663 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.14□□□□□ -1.75
LMX1BO60663 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.14□□□□□ -1.75
LMX1BO60663 MIR5096-201ENST00000583713 70 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.14□□□□□ -1.75
LMX1BO60663 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.14□□□□□ -1.75
LMX1BO60663 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.14□□□□□ -1.75
LMX1BO60663 DPRXP5-201ENST00000604662 539 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 AL583856.2-201ENST00000606298 543 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 AC080013.3-201ENST00000606839 578 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 VIS1.1-201ENST00000610517 203 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LMX1BO60663 AC107075.1-201ENST00000613695 314 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 AC083809.1-201ENST00000615051 472 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMX1BO60663 AL359757.1-201ENST00000623176 255 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LMX1BO60663 AC007490.1-201ENST00000624321 703 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 AC091965.5-201ENST00000624785 342 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
LMX1BO60663 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMX1BO60663 AC027228.2-201ENST00000567141 2154 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMX1BO60663 AC108751.5-201ENST00000492880 1336 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.14□□□□□ -1.75
LMX1BO60663 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
LMX1BO60663 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMX1BO60663 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMX1BO60663 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LMX1BO60663 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.14□□□□□ -1.75
LMX1BO60663 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LMX1BO60663 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
LMX1BO60663 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LMX1BO60663 AL049737.1-201ENST00000413920 1403 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.13□□□□□ -1.75
LMX1BO60663 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LMX1BO60663 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LMX1BO60663 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
LMX1BO60663 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LMX1BO60663 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LMX1BO60663 Y_RNA.201-201ENST00000364052 96 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 SNORA70.2-201ENST00000364506 135 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LMX1BO60663 MIR142-201ENST00000384835 87 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 RNU1-82P-201ENST00000390851 165 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 ATP5F1P3-201ENST00000397213 657 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 HMGB3P7-201ENST00000400214 611 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 AL138880.1-201ENST00000405824 642 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 AL031779.1-201ENST00000415663 330 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 RPL18P10-201ENST00000425606 538 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 AL593851.1-201ENST00000426171 157 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.13□□□□□ -1.75
LMX1BO60663 YWHAEP5-201ENST00000431545 765 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.13□□□□□ -1.75
LMX1BO60663 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 ISCA1P2-201ENST00000438679 421 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 RPS26P2-201ENST00000440331 348 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 UBE2D3P4-201ENST00000441973 436 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.13□□□□□ -1.75
LMX1BO60663 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 MRPL48P1-201ENST00000445390 636 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 MTCO2P7-201ENST00000446518 666 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.13□□□□□ -1.75
LMX1BO60663 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.13□□□□□ -1.75
LMX1BO60663 RPL10P17-201ENST00000453852 316 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.13□□□□□ -1.75
LMX1BO60663 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.13□□□□□ -1.75
LMX1BO60663 MTND3P7-201ENST00000474435 343 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.13□□□□□ -1.75
LMX1BO60663 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.13□□□□□ -1.75
LMX1BO60663 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.13□□□□□ -1.75
LMX1BO60663 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LMX1BO60663 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.13□□□□□ -1.75
LMX1BO60663 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.13□□□□□ -1.75
LMX1BO60663 PRELID3BP4-201ENST00000515476 571 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 FABP5P12-201ENST00000515543 389 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 IGHV3-63-201ENST00000518422 341 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.13□□□□□ -1.75
LMX1BO60663 AC009643.1-201ENST00000532030 391 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.13□□□□□ -1.75
LMX1BO60663 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.13□□□□□ -1.75
LMX1BO60663 SETP1-201ENST00000556014 845 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.13□□□□□ -1.75
LMX1BO60663 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.13□□□□□ -1.75
LMX1BO60663 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.13□□□□□ -1.75
LMX1BO60663 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.13□□□□□ -1.75
LMX1BO60663 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LMX1BO60663 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.13□□□□□ -1.75
LMX1BO60663 AC124312.4-201ENST00000605533 310 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 AL121932.1-201ENST00000605542 214 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms