Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SGCEO43556 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SGCEO43556 SNORA60-201ENST00000362396 134 ntBASIC3.59□□□□□ -1.83
SGCEO43556 SNORD35B-201ENST00000363660 87 ntBASIC3.59□□□□□ -1.83
SGCEO43556 OR6C69P-201ENST00000394268 893 ntBASIC3.59□□□□□ -1.83
SGCEO43556 AMZ2P2-201ENST00000406819 1057 ntBASIC3.59□□□□□ -1.83
SGCEO43556 RPL26P37-201ENST00000411983 438 ntBASIC3.59□□□□□ -1.83
SGCEO43556 AC009237.5-201ENST00000414271 501 ntBASIC3.59□□□□□ -1.83
SGCEO43556 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.59□□□□□ -1.83
SGCEO43556 AC108032.1-201ENST00000416706 207 ntBASIC3.59□□□□□ -1.83
SGCEO43556 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.59□□□□□ -1.83
SGCEO43556 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.59□□□□□ -1.83
SGCEO43556 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.59□□□□□ -1.83
SGCEO43556 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.59□□□□□ -1.83
SGCEO43556 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SGCEO43556 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.59□□□□□ -1.83
SGCEO43556 CBX1P4-201ENST00000439415 457 ntBASIC3.59□□□□□ -1.83
SGCEO43556 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.59□□□□□ -1.83
SGCEO43556 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SGCEO43556 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.59□□□□□ -1.83
SGCEO43556 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.59□□□□□ -1.83
SGCEO43556 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.59□□□□□ -1.83
SGCEO43556 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.59□□□□□ -1.83
SGCEO43556 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SGCEO43556 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
SGCEO43556 RN7SL604P-201ENST00000492589 296 ntBASIC3.59□□□□□ -1.83
SGCEO43556 RPS27AP13-201ENST00000498403 237 ntBASIC3.59□□□□□ -1.83
SGCEO43556 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.59□□□□□ -1.83
SGCEO43556 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.59□□□□□ -1.83
SGCEO43556 RNU7-143P-201ENST00000516781 65 ntBASIC3.59□□□□□ -1.83
SGCEO43556 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.59□□□□□ -1.83
SGCEO43556 HIGD1AP18-201ENST00000520730 278 ntBASIC3.59□□□□□ -1.83
SGCEO43556 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.59□□□□□ -1.83
SGCEO43556 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.59□□□□□ -1.83
SGCEO43556 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.59□□□□□ -1.83
SGCEO43556 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.59□□□□□ -1.83
SGCEO43556 AC079171.1-201ENST00000568788 914 ntBASIC3.59□□□□□ -1.83
SGCEO43556 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.59□□□□□ -1.83
SGCEO43556 AC055764.2-201ENST00000610089 670 ntBASIC3.59□□□□□ -1.83
SGCEO43556 AC023043.4-201ENST00000612081 449 ntBASIC3.59□□□□□ -1.83
SGCEO43556 CR392039.4-201ENST00000624968 501 ntBASIC3.59□□□□□ -1.83
SGCEO43556 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SGCEO43556 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SGCEO43556 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
SGCEO43556 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SGCEO43556 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SGCEO43556 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
SGCEO43556 CCT8P1-201ENST00000413611 1657 ntBASIC3.59□□□□□ -1.84
SGCEO43556 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SGCEO43556 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SGCEO43556 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SGCEO43556 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.58□□□□□ -1.84
SGCEO43556 SNORA37-201ENST00000384504 129 ntBASIC3.58□□□□□ -1.84
SGCEO43556 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.58□□□□□ -1.84
SGCEO43556 AC092832.1-201ENST00000422934 400 ntBASIC3.58□□□□□ -1.84
SGCEO43556 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SGCEO43556 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.58□□□□□ -1.84
SGCEO43556 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.58□□□□□ -1.84
SGCEO43556 FCF1P7-201ENST00000451185 558 ntBASIC3.58□□□□□ -1.84
SGCEO43556 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.58□□□□□ -1.84
SGCEO43556 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.58□□□□□ -1.84
SGCEO43556 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.58□□□□□ -1.84
SGCEO43556 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.58□□□□□ -1.84
SGCEO43556 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.58□□□□□ -1.84
SGCEO43556 SNORD108-201ENST00000459332 71 ntBASIC3.58□□□□□ -1.84
SGCEO43556 RPL38P1-201ENST00000460914 211 ntBASIC3.58□□□□□ -1.84
SGCEO43556 RPL7P48-201ENST00000461513 746 ntBASIC3.58□□□□□ -1.84
SGCEO43556 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.58□□□□□ -1.84
SGCEO43556 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.58□□□□□ -1.84
SGCEO43556 HPRT1P2-201ENST00000505250 544 ntBASIC3.58□□□□□ -1.84
SGCEO43556 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.58□□□□□ -1.84
SGCEO43556 AC109458.1-201ENST00000508858 316 ntBASIC3.58□□□□□ -1.84
SGCEO43556 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SGCEO43556 AC067904.2-201ENST00000517322 1283 ntBASIC3.58□□□□□ -1.84
SGCEO43556 IGKV2-38-201ENST00000517443 247 ntBASIC3.58□□□□□ -1.84
SGCEO43556 IGKV2D-10-201ENST00000520194 281 ntBASIC3.58□□□□□ -1.84
SGCEO43556 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.58□□□□□ -1.84
SGCEO43556 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.58□□□□□ -1.84
SGCEO43556 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.58□□□□□ -1.84
SGCEO43556 AC025627.2-201ENST00000576220 160 ntBASIC3.58□□□□□ -1.84
SGCEO43556 AP005901.4-201ENST00000577336 569 ntBASIC3.58□□□□□ -1.84
SGCEO43556 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.58□□□□□ -1.84
SGCEO43556 AC023575.1-201ENST00000580510 358 ntBASIC3.58□□□□□ -1.84
SGCEO43556 MIR5684-201ENST00000585074 65 ntBASIC3.58□□□□□ -1.84
SGCEO43556 MIR3138-201ENST00000585238 82 ntBASIC3.58□□□□□ -1.84
SGCEO43556 AC103710.3-201ENST00000608157 948 ntBASIC3.58□□□□□ -1.84
SGCEO43556 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SGCEO43556 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.58□□□□□ -1.84
SGCEO43556 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.58□□□□□ -1.84
SGCEO43556 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.58□□□□□ -1.84
SGCEO43556 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.58□□□□□ -1.84
SGCEO43556 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
SGCEO43556 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
SGCEO43556 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.57□□□□□ -1.84
SGCEO43556 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SGCEO43556 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
SGCEO43556 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
SGCEO43556 U1.1-201ENST00000384101 164 ntBASIC3.57□□□□□ -1.84
SGCEO43556 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SGCEO43556 AL807761.1-201ENST00000417622 171 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms