Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AL158073.1-201ENST00000426848 1104 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 RPS27AP6-201ENST00000427962 448 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 COX6CP13-201ENST00000428703 226 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 C8orf59P1-201ENST00000429930 303 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 YWHAZP2-201ENST00000440317 728 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 MTND1P1-201ENST00000445453 368 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 OR1H1P-201ENST00000448731 937 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AC092045.1-201ENST00000495716 1231 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AL121766.1-201ENST00000547436 487 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AL390726.5-202ENST00000564800 256 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AGGF1P4-201ENST00000568249 801 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 RN7SL290P-201ENST00000578661 300 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 MIR5708-201ENST00000579723 85 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 MTATP6P3-201ENST00000581686 676 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 VN1R90P-201ENST00000595717 726 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AC092653.1-201ENST00000608509 531 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AP004607.9-201ENST00000618202 316 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AC092656.1-203ENST00000624134 423 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 MAPK10-304ENST00000641341 3984 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AC021242.1-201ENST00000507315 2035 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AC000367.1-201ENST00000452711 1766 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 NCLP2-201ENST00000416078 1462 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 MAPK10-349ENST00000641767 3661 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 Y_RNA.192-201ENST00000363977 102 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 snoZ40.1-201ENST00000364540 72 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AL079342.2-201ENST00000403367 482 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 BX323845.1-201ENST00000432417 179 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 NMNAT1P2-201ENST00000435192 860 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 H2AFZP6-201ENST00000444403 394 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 GYG1P1-201ENST00000460864 698 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 RN7SL738P-201ENST00000470264 297 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AC011979.1-201ENST00000472300 483 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 GAPDHP56-201ENST00000506031 988 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AC010424.1-201ENST00000506336 297 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AC008885.2-201ENST00000509506 930 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 BTG4P1-201ENST00000510421 183 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 OR7H2P-201ENST00000513483 306 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AC060788.1-201ENST00000521318 469 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 NDUFB4P11-201ENST00000560510 395 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 TVP23CP2-201ENST00000571473 623 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 MIR4330-201ENST00000579077 105 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AP001542.2-201ENST00000593141 364 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AC006539.2-201ENST00000601729 572 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AL021997.1-201ENST00000605757 193 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AL592148.2-201ENST00000612210 372 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AC011815.3-201ENST00000624194 473 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AC092104.1-201ENST00000497346 1441 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms