Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 MTND4P10-201ENST00000446199 1363 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 MIR331-201ENST00000362302 94 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 RNU1-18P-201ENST00000363062 164 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 RNA5SP447-201ENST00000363749 119 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 HMGN2P8-201ENST00000391458 268 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 SNORA11F-201ENST00000408237 128 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 RNU4-74P-201ENST00000411280 161 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AC092832.1-201ENST00000422934 400 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AC115285.1-201ENST00000424879 736 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AL445528.1-201ENST00000426330 420 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 TPTE2P1-204ENST00000435256 593 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 MTCYBP21-201ENST00000443300 1113 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 VN1R25P-201ENST00000443385 738 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 VN1R40P-201ENST00000455196 941 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 RPL36AP13-201ENST00000457490 317 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 RPL23AP24-201ENST00000458203 385 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AC013356.1-201ENST00000489027 564 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 RN7SKP82-201ENST00000516786 223 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 MTCO3P22-201ENST00000603219 784 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 AC005191.1-201ENST00000603950 358 ntBASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCNB1IP1Q9NPC3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 PGBD4P8-201ENST00000412993 562 ntBASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 RPL26P29-201ENST00000415623 438 ntBASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 AC114814.2-201ENST00000419195 485 ntBASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 CEACAMP9-201ENST00000442990 513 ntBASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 AL500522.2-201ENST00000448562 343 ntBASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 RPS29P33-201ENST00000456717 146 ntBASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 RN7SL98P-201ENST00000462271 300 ntBASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 OR52A4P-203ENST00000498233 1014 ntBASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 AC093840.1-201ENST00000511599 336 ntBASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 RNA5SP309-201ENST00000516670 106 ntBASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 AL109741.3-201ENST00000561748 592 ntBASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 AP003117.2-201ENST00000606010 545 ntBASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.79□□□□□ -1.8
CCNB1IP1Q9NPC3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 RPL23AP59-201ENST00000399415 461 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms