Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.65□□□□□ -1.5
VTA1Q9NP79 AC005962.2-201ENST00000611427 652 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 AL139418.1-201ENST00000613613 177 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 MIR7703-201ENST00000620784 77 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 AC091931.1-201ENST00000623488 728 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 AC116563.2-201ENST00000624751 535 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.65□□□□□ -1.51
VTA1Q9NP79 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
VTA1Q9NP79 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VTA1Q9NP79 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
VTA1Q9NP79 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VTA1Q9NP79 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.65□□□□□ -1.51
VTA1Q9NP79 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VTA1Q9NP79 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.65□□□□□ -1.51
VTA1Q9NP79 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VTA1Q9NP79 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VTA1Q9NP79 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VTA1Q9NP79 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.65□□□□□ -1.51
VTA1Q9NP79 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
VTA1Q9NP79 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VTA1Q9NP79 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
VTA1Q9NP79 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 AL390862.1-201ENST00000635467 1469 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTA1Q9NP79 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTA1Q9NP79 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTA1Q9NP79 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTA1Q9NP79 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTA1Q9NP79 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTA1Q9NP79 RNU6-582P-201ENST00000362989 107 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 RNU6-492P-201ENST00000363035 104 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 RNU6-623P-201ENST00000363143 105 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 RNU5D-1-201ENST00000363299 116 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 RPS3AP26-201ENST00000398259 784 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 EI24P3-201ENST00000399046 1062 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 ZNF885P-201ENST00000420174 1098 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC233981.1-201ENST00000423224 461 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 RPS27AP6-201ENST00000427962 448 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC241584.1-201ENST00000438469 1241 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 AL591503.2-201ENST00000442314 1005 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 GTF3AP5-201ENST00000442645 697 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 COX6CP18-201ENST00000448769 222 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 AL591363.1-201ENST00000450091 483 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC091180.1-201ENST00000462104 372 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC011005.3-201ENST00000491624 395 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 RN7SL441P-201ENST00000492388 296 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC098976.1-201ENST00000513014 541 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 RPS27AP18-201ENST00000515536 459 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 RNU6-488P-201ENST00000515918 99 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC007954.1-201ENST00000554198 494 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 VN1R92P-201ENST00000598511 928 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC103881.1-201ENST00000603476 538 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC008745.1-201ENST00000604064 271 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC010738.1-201ENST00000604970 987 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC087359.1-201ENST00000508335 1740 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTA1Q9NP79 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTA1Q9NP79 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.64□□□□□ -1.51
VTA1Q9NP79 CDR1-202ENST00000625883 1485 ntBASIC5.64□□□□□ -1.51
VTA1Q9NP79 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTA1Q9NP79 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VTA1Q9NP79 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTA1Q9NP79 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTA1Q9NP79 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 RNA5SP191-201ENST00000362585 102 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 RNA5SP505-201ENST00000364748 108 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 OR1L6-202ENST00000373684 1044 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VTA1Q9NP79 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VTA1Q9NP79 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTA1Q9NP79 AL121978.1-201ENST00000402778 359 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 RNU2-42P-201ENST00000410697 113 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 COX6CP13-201ENST00000428703 226 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 AL035407.1-201ENST00000429211 571 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 AL590103.1-201ENST00000434488 307 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 196.1 ms