Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC016550.3-201ENST00000515706 767 ntBASIC5.56□□□□□ -1.52
SIN3AQ96ST3 RNU6-1102P-201ENST00000516149 96 ntBASIC5.56□□□□□ -1.52
SIN3AQ96ST3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 AC005255.1-201ENST00000593748 216 ntBASIC5.56□□□□□ -1.52
SIN3AQ96ST3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 BNIP3P39-201ENST00000601077 554 ntBASIC5.56□□□□□ -1.52
SIN3AQ96ST3 MRPS35P3-201ENST00000603189 709 ntBASIC5.56□□□□□ -1.52
SIN3AQ96ST3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 IPO8P1-201ENST00000455509 3109 ntBASIC5.56□□□□□ -1.52
SIN3AQ96ST3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 AC083899.2-201ENST00000423285 1376 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIN3AQ96ST3 AL592494.2-201ENST00000425455 1548 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SIN3AQ96ST3 AL391219.1-201ENST00000422570 483 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.55□□□□□ -1.52
SIN3AQ96ST3 AL034379.1-201ENST00000423216 253 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.55□□□□□ -1.52
SIN3AQ96ST3 NANOGP6-201ENST00000429190 847 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIN3AQ96ST3 HSFY7P-201ENST00000432672 318 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 HSFY8P-201ENST00000437934 318 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 HSFY5P-201ENST00000453726 309 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.55□□□□□ -1.52
SIN3AQ96ST3 AC093770.1-201ENST00000511559 571 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SIN3AQ96ST3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.55□□□□□ -1.52
SIN3AQ96ST3 MIR5685-201ENST00000579080 79 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.55□□□□□ -1.52
SIN3AQ96ST3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.55□□□□□ -1.52
SIN3AQ96ST3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.55□□□□□ -1.52
SIN3AQ96ST3 SNORA62.6-201ENST00000606322 83 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 AC004775.1-201ENST00000607389 753 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 RNU6-84P-201ENST00000607737 102 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 AL163051.2-201ENST00000618976 735 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 AC019080.5-201ENST00000624891 757 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 ATE1-AS1-202ENST00000636460 506 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SIN3AQ96ST3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SIN3AQ96ST3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.55□□□□□ -1.52
SIN3AQ96ST3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.55□□□□□ -1.52
SIN3AQ96ST3 MTND4P26-201ENST00000415971 1359 ntBASIC5.55□□□□□ -1.52
SIN3AQ96ST3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 RNU6-249P-201ENST00000363016 102 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC025750.1-201ENST00000399891 379 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AL121834.1-202ENST00000404494 277 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AL353692.2-201ENST00000407054 335 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AL445584.1-201ENST00000431451 330 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC245517.2-201ENST00000442890 346 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 NANOGP10-201ENST00000453325 895 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 TRBV12-2-201ENST00000489763 344 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 MTCO1P31-201ENST00000506355 492 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC010468.3-201ENST00000508225 458 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC079148.1-201ENST00000565944 819 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC107982.3-201ENST00000584957 985 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 ZNF92P2-201ENST00000600543 1059 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC135178.6-201ENST00000605314 398 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC242628.1-201ENST00000606810 391 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC026368.1-201ENST00000614934 690 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AL139089.1-201ENST00000620372 975 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AF001550.2-201ENST00000636643 217 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC018555.1-201ENST00000567548 1980 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC092111.2-201ENST00000611627 1414 ntBASIC5.54□□□□□ -1.52
SIN3AQ96ST3 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.54□□□□□ -1.52
SIN3AQ96ST3 AC017002.4-201ENST00000604721 1525 ntBASIC5.53□□□□□ -1.52
SIN3AQ96ST3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SIN3AQ96ST3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
SIN3AQ96ST3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SIN3AQ96ST3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms