Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AL354719.1-201ENST00000406535 843 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 RNU6ATAC21P-201ENST00000408656 126 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 RN7SKP235-201ENST00000410662 305 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 RPL30P3-201ENST00000424262 333 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AL139158.1-201ENST00000424719 340 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 OR5BE1P-201ENST00000425977 939 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AC112498.1-201ENST00000444401 332 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AL356390.1-201ENST00000455684 397 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 HMGB1P21-201ENST00000502313 581 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 RNU6-56P-201ENST00000516986 93 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 TRMT10BP1-201ENST00000519377 943 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 OR4A2P-201ENST00000527276 913 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AC092490.3-201ENST00000545370 572 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 SYF2P1-201ENST00000550658 413 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 DUXAP6-201ENST00000553858 601 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 MIR6885-201ENST00000612241 66 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AL133243.1-201ENST00000614487 366 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AC090617.7-201ENST00000623952 126 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AL691477.1-201ENST00000624398 162 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 AP001052.1-201ENST00000626421 99 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 OR5BE1P-202ENST00000641168 1176 ntBASIC2.22□□□□□ -2.05
LINC00643Q86TS7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LINC00643Q86TS7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.21□□□□□ -2.05
LINC00643Q86TS7 SAGE2P-201ENST00000420011 2126 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AC011978.2-201ENST00000569835 2054 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AC009487.2-201ENST00000420969 6821 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 MIR331-201ENST00000362302 94 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 RNU1-130P-201ENST00000363930 160 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 RNU1-132P-201ENST00000364300 164 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 MIR199A2-201ENST00000385289 110 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 RNA5SP36-201ENST00000410197 133 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 RN7SKP39-201ENST00000410773 322 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 RPL7P10-201ENST00000417407 739 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 BX510359.2-201ENST00000417920 305 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 APCDD1L-AS1-204ENST00000427794 461 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 RPL21P40-201ENST00000428586 483 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AC007559.1-201ENST00000428736 355 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AC109583.1-201ENST00000432156 268 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AL139135.2-201ENST00000445040 433 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AC144530.1-201ENST00000452862 555 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 GSTA11P-201ENST00000452866 669 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 RNA5SP246-201ENST00000458909 119 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 OR2A1-AS1-202ENST00000467944 422 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AC084357.1-201ENST00000473404 255 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 RPL7P39-201ENST00000481157 744 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 RPL37AP8-201ENST00000494116 276 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 RNA5SP208-201ENST00000516156 78 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AC027281.1-201ENST00000574178 758 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AC012119.1-201ENST00000603184 222 ntBASIC2.21□□□□□ -2.06
LINC00643Q86TS7 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LINC00643Q86TS7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms