Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC007424.1-203ENST00000554613 687 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 AC079075.1-201ENST00000559543 878 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 AC023824.3-201ENST00000569003 562 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 AC093673.2-201ENST00000609674 331 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 RNU6-156P-201ENST00000621869 107 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 AC073342.3-201ENST00000624211 193 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 AC006971.1-201ENST00000407916 4486 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NUP54Q7Z3B4 SAGE4P-201ENST00000442271 3381 ntBASIC4.34□□□□□ -1.72
NUP54Q7Z3B4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NUP54Q7Z3B4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AC012020.1-201ENST00000624541 1728 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 OR56B2P-201ENST00000317102 954 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 RNA5SP167-201ENST00000365461 116 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 MIR525-201ENST00000384978 85 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 MIR937-201ENST00000401271 86 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 Z98745.1-201ENST00000402553 494 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 ARL4AP5-201ENST00000404372 599 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 SNORA11C-201ENST00000408532 129 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 RNU2-21P-201ENST00000410368 188 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AC012519.1-201ENST00000424588 610 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 RPL21P43-201ENST00000425440 472 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AL359265.2-201ENST00000434367 631 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 USP9YP7-201ENST00000436723 430 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 USP9YP32-201ENST00000452432 430 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 MRPL35P4-201ENST00000453682 566 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 CDC42P1-201ENST00000456658 548 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AC090142.1-201ENST00000465776 462 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 RPL23AP65-201ENST00000475608 468 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 RN7SKP157-201ENST00000516174 282 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 RN7SKP277-201ENST00000516895 283 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AC124293.1-201ENST00000530034 493 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AC006518.2-201ENST00000542513 940 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AC135001.1-201ENST00000544546 283 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AL352979.3-201ENST00000553515 247 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AL606834.3-201ENST00000602615 496 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 BNIP3P4-201ENST00000604946 565 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AC013468.1-201ENST00000608680 598 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AL161616.1-201ENST00000611867 286 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AL713922.2-201ENST00000619384 716 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AC022960.3-201ENST00000619794 441 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AC099654.9-201ENST00000637055 678 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AC090337.1-201ENST00000579651 2074 ntBASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUP54Q7Z3B4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC010300.1-201ENST00000600671 5134 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 MAPK10-303ENST00000641324 3959 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC008725.1-201ENST00000605123 2263 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 RN7SKP115-201ENST00000363177 317 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 RNU6-236P-201ENST00000363886 106 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 RNU6-298P-201ENST00000390888 96 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms