Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC009318.3-201ENST00000616916 503 ntBASIC4.33□□□□□ -1.72
LYSMD4Q5XG99 MIR6875-201ENST00000617506 72 ntBASIC4.33□□□□□ -1.72
LYSMD4Q5XG99 AC024595.1-201ENST00000623088 387 ntBASIC4.33□□□□□ -1.72
LYSMD4Q5XG99 AC004808.1-201ENST00000627671 721 ntBASIC4.33□□□□□ -1.72
LYSMD4Q5XG99 MAPK10-286ENST00000641208 8747 ntBASIC4.33□□□□□ -1.72
LYSMD4Q5XG99 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LYSMD4Q5XG99 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LYSMD4Q5XG99 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LYSMD4Q5XG99 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.33□□□□□ -1.72
LYSMD4Q5XG99 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LYSMD4Q5XG99 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LYSMD4Q5XG99 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LYSMD4Q5XG99 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AL133268.1-201ENST00000405676 1401 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 CYCSP19-201ENST00000411715 316 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 RPS20P14-201ENST00000412545 360 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AC073069.1-201ENST00000428657 441 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 COX6B1P7-201ENST00000430845 235 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AC011242.1-201ENST00000433596 1158 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AL645638.1-201ENST00000440519 361 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 TCEA1P3-201ENST00000443005 880 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 RHEBP2-201ENST00000450289 600 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 TVP23BP2-201ENST00000455082 615 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 TRBV8-2-201ENST00000475637 270 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AC069304.1-201ENST00000491593 704 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 ATP1B1P1-201ENST00000509767 915 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 KCTD9P2-201ENST00000512203 1013 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AC108064.1-201ENST00000513791 460 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 IGKV2-36-201ENST00000519999 223 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AC083923.1-201ENST00000523708 376 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AC011611.5-201ENST00000552477 578 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AC023825.1-201ENST00000566704 1030 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AC115085.1-201ENST00000588924 229 ntBASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD4Q5XG99 AL353743.4-201ENST00000422653 1547 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 AL645568.2-201ENST00000432815 1337 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 AC093535.2-201ENST00000624769 2326 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 RNA5SP175-201ENST00000364275 119 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 RNU6-1257P-201ENST00000384625 110 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 RPL21P65-201ENST00000406094 466 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 RPL31P52-201ENST00000407532 367 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 RN7SKP159-201ENST00000410657 292 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 AL512326.1-201ENST00000443050 721 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 AC068135.1-201ENST00000446164 246 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 GTF2IP12-201ENST00000456547 356 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 VN1R105P-201ENST00000486595 910 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 UBA52P3-201ENST00000491303 382 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 AL592156.1-201ENST00000508758 304 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 AC008565.1-201ENST00000509046 885 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 RNA5SP519-201ENST00000516480 119 ntBASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.31□□□□□ -1.72
LYSMD4Q5XG99 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms