Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.67□□□□□ -1.66
RAE1P78406 AL031595.2-201ENST00000624215 19071 ntBASIC4.67□□□□□ -1.66
RAE1P78406 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.67□□□□□ -1.66
RAE1P78406 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RAE1P78406 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RAE1P78406 RNU6-623P-201ENST00000363143 105 ntBASIC4.67□□□□□ -1.66
RAE1P78406 SNORD116-4-201ENST00000384733 96 ntBASIC4.67□□□□□ -1.66
RAE1P78406 RNA5SP345-201ENST00000410646 108 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.67□□□□□ -1.66
RAE1P78406 GJA6P-201ENST00000415117 1042 ntBASIC4.67□□□□□ -1.66
RAE1P78406 TBCAP2-201ENST00000416175 326 ntBASIC4.67□□□□□ -1.66
RAE1P78406 BOLA3P4-201ENST00000418151 400 ntBASIC4.67□□□□□ -1.66
RAE1P78406 RGS17P1-201ENST00000423358 553 ntBASIC4.67□□□□□ -1.66
RAE1P78406 EIF4HP2-201ENST00000424380 563 ntBASIC4.67□□□□□ -1.66
RAE1P78406 RPP40P1-201ENST00000426762 456 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AC244035.1-201ENST00000430042 390 ntBASIC4.67□□□□□ -1.66
RAE1P78406 MTND1P20-201ENST00000430341 950 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AL513175.1-201ENST00000431492 780 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.67□□□□□ -1.66
RAE1P78406 AC092162.1-201ENST00000432828 434 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AL590103.1-201ENST00000434488 307 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.67□□□□□ -1.66
RAE1P78406 FHP1-201ENST00000442741 703 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.67□□□□□ -1.66
RAE1P78406 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.67□□□□□ -1.66
RAE1P78406 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.67□□□□□ -1.66
RAE1P78406 AL354710.1-201ENST00000453641 246 ntBASIC4.67□□□□□ -1.66
RAE1P78406 NF1P3-201ENST00000457709 450 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.67□□□□□ -1.66
RAE1P78406 RPL7AP10-201ENST00000481016 791 ntBASIC4.67□□□□□ -1.66
RAE1P78406 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.67□□□□□ -1.66
RAE1P78406 RN7SL97P-201ENST00000486780 299 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AC080014.1-201ENST00000496877 1201 ntBASIC4.67□□□□□ -1.66
RAE1P78406 SETP14-201ENST00000497538 873 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.67□□□□□ -1.66
RAE1P78406 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.67□□□□□ -1.66
RAE1P78406 HSPE1P23-201ENST00000509838 286 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AC004980.4-201ENST00000513375 203 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.67□□□□□ -1.66
RAE1P78406 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RAE1P78406 AC007954.1-201ENST00000554198 494 ntBASIC4.67□□□□□ -1.66
RAE1P78406 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.67□□□□□ -1.66
RAE1P78406 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.67□□□□□ -1.66
RAE1P78406 AC064872.1-201ENST00000604823 1072 ntBASIC4.67□□□□□ -1.66
RAE1P78406 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AC087783.2-201ENST00000605070 562 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AL354760.1-201ENST00000608357 643 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AC092653.1-201ENST00000608509 531 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.67□□□□□ -1.66
RAE1P78406 AC245297.2-201ENST00000610119 565 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AL512624.1-201ENST00000613638 469 ntBASIC4.67□□□□□ -1.66
RAE1P78406 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RAE1P78406 AC015804.1-201ENST00000622935 435 ntBASIC4.67□□□□□ -1.66
RAE1P78406 CR392039.4-201ENST00000624968 501 ntBASIC4.67□□□□□ -1.66
RAE1P78406 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.67□□□□□ -1.66
RAE1P78406 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RAE1P78406 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RAE1P78406 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RAE1P78406 AC107982.1-201ENST00000507171 1300 ntBASIC4.67□□□□□ -1.66
RAE1P78406 AC008758.3-201ENST00000507003 1829 ntBASIC4.67□□□□□ -1.66
RAE1P78406 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RAE1P78406 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.66□□□□□ -1.66
RAE1P78406 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.66□□□□□ -1.66
RAE1P78406 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.66□□□□□ -1.66
RAE1P78406 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RAE1P78406 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.66□□□□□ -1.66
RAE1P78406 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RAE1P78406 SCARNA15-201ENST00000607520 4325 ntBASIC4.66□□□□□ -1.66
RAE1P78406 RNU6-492P-201ENST00000363035 104 ntBASIC4.66□□□□□ -1.66
RAE1P78406 SNORA51.1-201ENST00000363243 140 ntBASIC4.66□□□□□ -1.66
RAE1P78406 SNORA4.1-201ENST00000364263 144 ntBASIC4.66□□□□□ -1.66
RAE1P78406 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RAE1P78406 Y_RNA.560-201ENST00000384689 102 ntBASIC4.66□□□□□ -1.66
RAE1P78406 RNU6-253P-201ENST00000384730 105 ntBASIC4.66□□□□□ -1.66
RAE1P78406 AC068533.2-201ENST00000411872 306 ntBASIC4.66□□□□□ -1.66
RAE1P78406 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.66□□□□□ -1.66
RAE1P78406 NPM1P40-201ENST00000412758 733 ntBASIC4.66□□□□□ -1.66
RAE1P78406 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.66□□□□□ -1.66
RAE1P78406 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.66□□□□□ -1.66
RAE1P78406 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.66□□□□□ -1.66
RAE1P78406 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.66□□□□□ -1.66
RAE1P78406 MTCO2P16-201ENST00000436962 677 ntBASIC4.66□□□□□ -1.66
RAE1P78406 ATP5C1P1-201ENST00000441945 895 ntBASIC4.66□□□□□ -1.66
RAE1P78406 AC004865.1-201ENST00000442276 1003 ntBASIC4.66□□□□□ -1.66
RAE1P78406 RAB11AP1-201ENST00000442978 646 ntBASIC4.66□□□□□ -1.66
RAE1P78406 AL137845.2-201ENST00000444292 988 ntBASIC4.66□□□□□ -1.66
RAE1P78406 MTND2P19-201ENST00000449129 1012 ntBASIC4.66□□□□□ -1.66
RAE1P78406 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.66□□□□□ -1.66
RAE1P78406 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.66□□□□□ -1.66
RAE1P78406 MTCO3P11-201ENST00000455103 774 ntBASIC4.66□□□□□ -1.66
RAE1P78406 MTCO2P18-201ENST00000457151 658 ntBASIC4.66□□□□□ -1.66
RAE1P78406 RPS4XP12-201ENST00000461747 709 ntBASIC4.66□□□□□ -1.66
RAE1P78406 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
RAE1P78406 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.66□□□□□ -1.66
RAE1P78406 AC023424.1-201ENST00000496058 459 ntBASIC4.66□□□□□ -1.66
RAE1P78406 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.66□□□□□ -1.66
RAE1P78406 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.66□□□□□ -1.66
RAE1P78406 AC025674.1-201ENST00000507074 324 ntBASIC4.66□□□□□ -1.66
RAE1P78406 MTND4LP31-201ENST00000514859 294 ntBASIC4.66□□□□□ -1.66
RAE1P78406 MTCO1P30-201ENST00000515244 580 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms