Protein–RNA interactions for Protein: P63316

TNNC1, Troponin C, slow skeletal and cardiac muscles, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNC1P63316 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TNNC1P63316 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.24□□□□□ -1.73
TNNC1P63316 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TNNC1P63316 SNORA57.1-201ENST00000391227 145 ntBASIC4.24□□□□□ -1.73
TNNC1P63316 HMGN2P8-201ENST00000391458 268 ntBASIC4.24□□□□□ -1.73
TNNC1P63316 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNNC1P63316 RPL23AP48-201ENST00000406913 488 ntBASIC4.24□□□□□ -1.73
TNNC1P63316 AC092017.2-201ENST00000427600 362 ntBASIC4.24□□□□□ -1.73
TNNC1P63316 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.24□□□□□ -1.73
TNNC1P63316 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.24□□□□□ -1.73
TNNC1P63316 RPL7P28-201ENST00000437739 740 ntBASIC4.24□□□□□ -1.73
TNNC1P63316 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.24□□□□□ -1.73
TNNC1P63316 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.24□□□□□ -1.73
TNNC1P63316 STRADBP1-201ENST00000478954 1281 ntBASIC4.24□□□□□ -1.73
TNNC1P63316 PPIAP15-201ENST00000479662 484 ntBASIC4.24□□□□□ -1.73
TNNC1P63316 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.24□□□□□ -1.73
TNNC1P63316 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.24□□□□□ -1.73
TNNC1P63316 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.24□□□□□ -1.73
TNNC1P63316 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.24□□□□□ -1.73
TNNC1P63316 AC108471.1-201ENST00000513977 287 ntBASIC4.24□□□□□ -1.73
TNNC1P63316 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.24□□□□□ -1.73
TNNC1P63316 AC084824.1-201ENST00000550917 1005 ntBASIC4.24□□□□□ -1.73
TNNC1P63316 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.24□□□□□ -1.73
TNNC1P63316 AC141257.3-201ENST00000572906 215 ntBASIC4.24□□□□□ -1.73
TNNC1P63316 AC053481.4-201ENST00000583164 216 ntBASIC4.24□□□□□ -1.73
TNNC1P63316 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.24□□□□□ -1.73
TNNC1P63316 AC015911.5-201ENST00000587076 451 ntBASIC4.24□□□□□ -1.73
TNNC1P63316 AC005255.1-201ENST00000593748 216 ntBASIC4.24□□□□□ -1.73
TNNC1P63316 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.24□□□□□ -1.73
TNNC1P63316 AL645927.2-201ENST00000618350 349 ntBASIC4.24□□□□□ -1.73
TNNC1P63316 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNNC1P63316 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.24□□□□□ -1.73
TNNC1P63316 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.24□□□□□ -1.73
TNNC1P63316 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNNC1P63316 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.24□□□□□ -1.73
TNNC1P63316 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
TNNC1P63316 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNNC1P63316 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TNNC1P63316 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
TNNC1P63316 RNU1-18P-201ENST00000363062 164 ntBASIC4.23□□□□□ -1.73
TNNC1P63316 RNA5SP97-201ENST00000365006 84 ntBASIC4.23□□□□□ -1.73
TNNC1P63316 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.23□□□□□ -1.73
TNNC1P63316 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.23□□□□□ -1.73
TNNC1P63316 Z97055.1-201ENST00000419730 712 ntBASIC4.23□□□□□ -1.73
TNNC1P63316 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNNC1P63316 RPL7P2-201ENST00000427639 268 ntBASIC4.23□□□□□ -1.73
TNNC1P63316 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.23□□□□□ -1.73
TNNC1P63316 NDUFS5P3-201ENST00000450668 321 ntBASIC4.23□□□□□ -1.73
TNNC1P63316 RPL21P11-201ENST00000461458 483 ntBASIC4.23□□□□□ -1.73
TNNC1P63316 RN7SL93P-201ENST00000463035 293 ntBASIC4.23□□□□□ -1.73
TNNC1P63316 AC010307.1-201ENST00000467206 836 ntBASIC4.23□□□□□ -1.73
TNNC1P63316 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.23□□□□□ -1.73
TNNC1P63316 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNNC1P63316 RNU6-319P-201ENST00000516025 108 ntBASIC4.23□□□□□ -1.73
TNNC1P63316 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.23□□□□□ -1.73
TNNC1P63316 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TNNC1P63316 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
TNNC1P63316 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.23□□□□□ -1.73
TNNC1P63316 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.23□□□□□ -1.73
TNNC1P63316 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.23□□□□□ -1.73
TNNC1P63316 PSMA6P4-201ENST00000603247 718 ntBASIC4.23□□□□□ -1.73
TNNC1P63316 AC012557.1-201ENST00000607115 611 ntBASIC4.23□□□□□ -1.73
TNNC1P63316 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.23□□□□□ -1.73
TNNC1P63316 AC145207.9-201ENST00000623802 325 ntBASIC4.23□□□□□ -1.73
TNNC1P63316 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.23□□□□□ -1.73
TNNC1P63316 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.23□□□□□ -1.73
TNNC1P63316 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TNNC1P63316 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.23□□□□□ -1.73
TNNC1P63316 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TNNC1P63316 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TNNC1P63316 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TNNC1P63316 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TNNC1P63316 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TNNC1P63316 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TNNC1P63316 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.22□□□□□ -1.73
TNNC1P63316 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
TNNC1P63316 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TNNC1P63316 RNU6-1279P-201ENST00000383917 103 ntBASIC4.22□□□□□ -1.73
TNNC1P63316 AL356967.1-201ENST00000406305 431 ntBASIC4.22□□□□□ -1.73
TNNC1P63316 NPM1P34-201ENST00000428821 893 ntBASIC4.22□□□□□ -1.73
TNNC1P63316 HMGB1P37-201ENST00000439613 609 ntBASIC4.22□□□□□ -1.73
TNNC1P63316 AC092809.1-201ENST00000441469 474 ntBASIC4.22□□□□□ -1.73
TNNC1P63316 RANP8-201ENST00000444720 713 ntBASIC4.22□□□□□ -1.73
TNNC1P63316 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.22□□□□□ -1.73
TNNC1P63316 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.22□□□□□ -1.73
TNNC1P63316 RPS3AP6-201ENST00000484430 795 ntBASIC4.22□□□□□ -1.73
TNNC1P63316 AC004069.2-201ENST00000505438 1114 ntBASIC4.22□□□□□ -1.73
TNNC1P63316 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TNNC1P63316 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.22□□□□□ -1.73
TNNC1P63316 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.22□□□□□ -1.73
TNNC1P63316 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.22□□□□□ -1.73
TNNC1P63316 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.22□□□□□ -1.73
TNNC1P63316 AC022916.3-201ENST00000592961 742 ntBASIC4.22□□□□□ -1.73
TNNC1P63316 AC025946.2-201ENST00000603398 234 ntBASIC4.22□□□□□ -1.73
TNNC1P63316 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.22□□□□□ -1.73
TNNC1P63316 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.22□□□□□ -1.73
TNNC1P63316 AC000123.2-201ENST00000623124 461 ntBASIC4.22□□□□□ -1.73
TNNC1P63316 MIR6715B-201ENST00000637172 77 ntBASIC4.22□□□□□ -1.73
TNNC1P63316 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
TNNC1P63316 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms