Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.19□□□□□ -1.9
LSM3P62310 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.19□□□□□ -1.9
LSM3P62310 RANP4-201ENST00000413361 655 ntBASIC3.19□□□□□ -1.9
LSM3P62310 AC019050.1-201ENST00000418508 492 ntBASIC3.19□□□□□ -1.9
LSM3P62310 RPL7P53-201ENST00000421245 739 ntBASIC3.19□□□□□ -1.9
LSM3P62310 COX6CP17-201ENST00000421389 185 ntBASIC3.19□□□□□ -1.9
LSM3P62310 MTCO1P51-201ENST00000427672 1060 ntBASIC3.19□□□□□ -1.9
LSM3P62310 AC022022.1-201ENST00000430304 178 ntBASIC3.19□□□□□ -1.9
LSM3P62310 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM3P62310 AL353597.2-202ENST00000434901 373 ntBASIC3.19□□□□□ -1.9
LSM3P62310 AL356276.2-201ENST00000435919 558 ntBASIC3.19□□□□□ -1.9
LSM3P62310 PTMAP6-201ENST00000439110 327 ntBASIC3.19□□□□□ -1.9
LSM3P62310 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM3P62310 AL357552.1-201ENST00000445254 415 ntBASIC3.19□□□□□ -1.9
LSM3P62310 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.19□□□□□ -1.9
LSM3P62310 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM3P62310 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM3P62310 IFNWP4-201ENST00000453148 294 ntBASIC3.19□□□□□ -1.9
LSM3P62310 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM3P62310 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.19□□□□□ -1.9
LSM3P62310 AL049830.2-201ENST00000480072 201 ntBASIC3.19□□□□□ -1.9
LSM3P62310 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM3P62310 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM3P62310 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM3P62310 DUXAP6-201ENST00000553858 601 ntBASIC3.19□□□□□ -1.9
LSM3P62310 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM3P62310 AC006077.1-201ENST00000604746 343 ntBASIC3.19□□□□□ -1.9
LSM3P62310 AL592436.1-201ENST00000605135 558 ntBASIC3.19□□□□□ -1.9
LSM3P62310 MIR6780A-201ENST00000615089 68 ntBASIC3.19□□□□□ -1.9
LSM3P62310 AC100827.5-201ENST00000615883 426 ntBASIC3.19□□□□□ -1.9
LSM3P62310 AC091953.3-201ENST00000623220 236 ntBASIC3.19□□□□□ -1.9
LSM3P62310 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM3P62310 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LSM3P62310 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM3P62310 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LSM3P62310 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LSM3P62310 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LSM3P62310 METTL5-202ENST00000308099 629 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM3P62310 EI24P2-201ENST00000397776 1076 ntBASIC3.18□□□□□ -1.9
LSM3P62310 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LSM3P62310 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM3P62310 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.18□□□□□ -1.9
LSM3P62310 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.18□□□□□ -1.9
LSM3P62310 CNOT7P1-201ENST00000429006 852 ntBASIC3.18□□□□□ -1.9
LSM3P62310 MRPL50P1-201ENST00000431951 384 ntBASIC3.18□□□□□ -1.9
LSM3P62310 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM3P62310 RPL12P46-201ENST00000436610 195 ntBASIC3.18□□□□□ -1.9
LSM3P62310 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM3P62310 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.18□□□□□ -1.9
LSM3P62310 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM3P62310 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM3P62310 RPS4XP15-201ENST00000489210 795 ntBASIC3.18□□□□□ -1.9
LSM3P62310 AC108078.3-201ENST00000502633 489 ntBASIC3.18□□□□□ -1.9
LSM3P62310 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM3P62310 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LSM3P62310 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.18□□□□□ -1.9
LSM3P62310 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM3P62310 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM3P62310 AC138701.1-201ENST00000524329 714 ntBASIC3.18□□□□□ -1.9
LSM3P62310 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM3P62310 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM3P62310 AC015726.1-201ENST00000602353 681 ntBASIC3.18□□□□□ -1.9
LSM3P62310 AC016769.4-201ENST00000616893 535 ntBASIC3.18□□□□□ -1.9
LSM3P62310 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM3P62310 AL732618.1-201ENST00000623251 301 ntBASIC3.18□□□□□ -1.9
LSM3P62310 MTND5P27-201ENST00000428871 1720 ntBASIC3.18□□□□□ -1.9
LSM3P62310 CASC19-261ENST00000641853 1638 ntBASIC3.18□□□□□ -1.9
LSM3P62310 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM3P62310 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LSM3P62310 AC007823.1-201ENST00000569932 1566 ntBASIC3.17□□□□□ -1.9
LSM3P62310 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.17□□□□□ -1.9
LSM3P62310 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LSM3P62310 RPS27AP11-201ENST00000402798 447 ntBASIC3.17□□□□□ -1.9
LSM3P62310 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM3P62310 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.17□□□□□ -1.9
LSM3P62310 AC002069.1-201ENST00000429649 1159 ntBASIC3.17□□□□□ -1.9
LSM3P62310 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM3P62310 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM3P62310 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM3P62310 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM3P62310 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
LSM3P62310 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
LSM3P62310 AC013356.1-201ENST00000489027 564 ntBASIC3.17□□□□□ -1.9
LSM3P62310 OR5H3P-201ENST00000502817 919 ntBASIC3.17□□□□□ -1.9
LSM3P62310 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM3P62310 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM3P62310 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.17□□□□□ -1.9
LSM3P62310 SNORD39.2-201ENST00000579995 76 ntBASIC3.17□□□□□ -1.9
LSM3P62310 RN7SL600P-201ENST00000581811 299 ntBASIC3.17□□□□□ -1.9
LSM3P62310 MIR3138-201ENST00000585238 82 ntBASIC3.17□□□□□ -1.9
LSM3P62310 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM3P62310 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LSM3P62310 MIR8059-201ENST00000620427 81 ntBASIC3.17□□□□□ -1.9
LSM3P62310 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM3P62310 AF001550.2-201ENST00000636643 217 ntBASIC3.17□□□□□ -1.9
LSM3P62310 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM3P62310 SRP72P2-201ENST00000344851 1979 ntBASIC3.17□□□□□ -1.9
LSM3P62310 MTCO1P11-201ENST00000429111 1528 ntBASIC3.17□□□□□ -1.9
LSM3P62310 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.17□□□□□ -1.9
LSM3P62310 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms