Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN6P56747 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
CLDN6P56747 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLDN6P56747 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLDN6P56747 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLDN6P56747 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
CLDN6P56747 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.78
CLDN6P56747 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.9□□□□□ -1.78
CLDN6P56747 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN6P56747 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CLDN6P56747 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN6P56747 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CLDN6P56747 RNU6-891P-201ENST00000384280 111 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 SNORA57.3-201ENST00000411095 141 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN6P56747 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN6P56747 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.9□□□□□ -1.79
CLDN6P56747 NPM1P34-201ENST00000428821 893 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 SKP1P3-201ENST00000429280 487 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 HMGN2P31-201ENST00000432430 273 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 CYCSP43-201ENST00000438233 310 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN6P56747 AC104978.1-201ENST00000449387 391 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 AC104306.1-201ENST00000449702 371 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN6P56747 AC005229.2-201ENST00000456995 399 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 MTND6P6-201ENST00000478031 263 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN6P56747 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN6P56747 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN6P56747 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN6P56747 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN6P56747 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN6P56747 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.9□□□□□ -1.79
CLDN6P56747 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN6P56747 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN6P56747 NPM1P47-201ENST00000560843 856 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.9□□□□□ -1.79
CLDN6P56747 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN6P56747 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.9□□□□□ -1.79
CLDN6P56747 AC022884.3-201ENST00000579571 248 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN6P56747 MIR5684-201ENST00000585074 65 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 MIR3922-201ENST00000585192 84 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.9□□□□□ -1.79
CLDN6P56747 HMGB1P51-201ENST00000605166 638 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN6P56747 AL159169.3-201ENST00000608871 561 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 AL391834.1-201ENST00000609609 560 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN6P56747 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN6P56747 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN6P56747 AC119674.1-212ENST00000641155 993 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN6P56747 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN6P56747 AC105074.1-201ENST00000623380 3095 ntBASIC3.9□□□□□ -1.79
CLDN6P56747 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CLDN6P56747 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN6P56747 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CLDN6P56747 AL049555.1-201ENST00000562834 1933 ntBASIC3.89□□□□□ -1.79
CLDN6P56747 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN6P56747 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN6P56747 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CLDN6P56747 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN6P56747 AC067945.1-201ENST00000342609 618 ntBASIC3.89□□□□□ -1.79
CLDN6P56747 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN6P56747 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN6P56747 ATP5F1P4-201ENST00000397288 746 ntBASIC3.89□□□□□ -1.79
CLDN6P56747 VN1R8P-201ENST00000407739 893 ntBASIC3.89□□□□□ -1.79
CLDN6P56747 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN6P56747 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN6P56747 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN6P56747 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN6P56747 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN6P56747 ARL5AP3-201ENST00000439327 386 ntBASIC3.89□□□□□ -1.79
CLDN6P56747 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN6P56747 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN6P56747 EIF2S2P4-201ENST00000461070 984 ntBASIC3.89□□□□□ -1.79
CLDN6P56747 AC092691.2-201ENST00000461787 803 ntBASIC3.89□□□□□ -1.79
CLDN6P56747 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN6P56747 PPBPP1-201ENST00000510807 373 ntBASIC3.89□□□□□ -1.79
CLDN6P56747 SNORA70.24-201ENST00000517233 118 ntBASIC3.89□□□□□ -1.79
CLDN6P56747 PAICSP4-201ENST00000517543 1253 ntBASIC3.89□□□□□ -1.79
CLDN6P56747 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN6P56747 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN6P56747 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN6P56747 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.89□□□□□ -1.79
CLDN6P56747 AC084757.1-201ENST00000559987 490 ntBASIC3.89□□□□□ -1.79
CLDN6P56747 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN6P56747 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN6P56747 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN6P56747 AC019176.2-201ENST00000611579 315 ntBASIC3.89□□□□□ -1.79
CLDN6P56747 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN6P56747 AC107905.1-201ENST00000616204 426 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms