Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.86□□□□□ -1.95
FOXA3P55318 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
FOXA3P55318 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
FOXA3P55318 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
FOXA3P55318 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.85□□□□□ -1.95
FOXA3P55318 AL353746.1-201ENST00000566293 6881 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 AC119744.1-201ENST00000454746 1715 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
FOXA3P55318 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
FOXA3P55318 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
FOXA3P55318 RNU1-132P-201ENST00000364300 164 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
FOXA3P55318 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
FOXA3P55318 AL590704.1-201ENST00000402856 794 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 MTHFD2P2-201ENST00000407725 247 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 RNU2-37P-201ENST00000410695 177 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.85□□□□□ -1.95
FOXA3P55318 AC048351.1-201ENST00000420064 602 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXA3P55318 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC2.85□□□□□ -1.95
FOXA3P55318 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.85□□□□□ -1.95
FOXA3P55318 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC2.85□□□□□ -1.95
FOXA3P55318 RPS3AP54-201ENST00000435535 734 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXA3P55318 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.85□□□□□ -1.95
FOXA3P55318 AC106806.2-201ENST00000509365 500 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.85□□□□□ -1.95
FOXA3P55318 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.85□□□□□ -1.95
FOXA3P55318 AC108471.1-201ENST00000513977 287 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXA3P55318 AC087369.1-201ENST00000520775 996 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 NDUFB9P3-201ENST00000521269 501 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXA3P55318 AP001636.2-201ENST00000525517 696 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 OR5AP1P-201ENST00000529730 940 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXA3P55318 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.85□□□□□ -1.95
FOXA3P55318 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXA3P55318 ZNF192P1-203ENST00000565888 810 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXA3P55318 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXA3P55318 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXA3P55318 MIR4436B2-201ENST00000581415 91 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 MIR4270-201ENST00000581799 70 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 MIR4436B1-201ENST00000583272 91 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXA3P55318 AC022146.1-201ENST00000595307 847 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 AC006254.3-201ENST00000603353 884 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.85□□□□□ -1.95
FOXA3P55318 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.85□□□□□ -1.95
FOXA3P55318 SDR42E1P1-201ENST00000611327 477 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
FOXA3P55318 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.85□□□□□ -1.95
FOXA3P55318 AC123768.4-201ENST00000616244 701 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 AC099669.2-201ENST00000616549 437 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXA3P55318 MIR7153-201ENST00000637758 57 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
FOXA3P55318 CIR1P2-201ENST00000514821 1342 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
FOXA3P55318 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.85□□□□□ -1.95
FOXA3P55318 GABPAP-201ENST00000419271 1356 ntBASIC2.85□□□□□ -1.95
FOXA3P55318 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
FOXA3P55318 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
FOXA3P55318 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
FOXA3P55318 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
FOXA3P55318 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
FOXA3P55318 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
FOXA3P55318 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC2.84□□□□□ -1.95
FOXA3P55318 MIR129-1-201ENST00000384972 72 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
FOXA3P55318 MTCO3P31-201ENST00000405526 789 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 AL035696.2-201ENST00000407941 709 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 LIPT1P1-201ENST00000415870 1186 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 TRGV6-201ENST00000417928 299 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 AC069213.2-201ENST00000420238 366 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 BX510359.3-201ENST00000422168 306 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 AL360081.1-201ENST00000428299 555 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 RPL23AP1-201ENST00000428990 471 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 RPS29P17-201ENST00000430795 166 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.84□□□□□ -1.95
FOXA3P55318 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.84□□□□□ -1.95
FOXA3P55318 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC2.84□□□□□ -1.95
FOXA3P55318 MTCYBP31-201ENST00000438855 1122 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 AC245517.2-201ENST00000442890 346 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC2.84□□□□□ -1.95
FOXA3P55318 AC006480.1-201ENST00000449887 378 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 RPS11P1-201ENST00000451072 473 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 AC006539.3-201ENST00000454258 129 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 AC087312.1-201ENST00000471411 480 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 RN7SL860P-201ENST00000473738 223 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 AP000893.1-201ENST00000474462 794 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 NPM1P17-201ENST00000479221 602 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 ACTG1P13-201ENST00000486987 1043 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 RN7SL604P-201ENST00000492589 296 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC2.84□□□□□ -1.95
FOXA3P55318 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
FOXA3P55318 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC2.84□□□□□ -1.95
FOXA3P55318 OR4A12P-201ENST00000530847 918 ntBASIC2.84□□□□□ -1.95
FOXA3P55318 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms