Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 NSRP1P1-201ENST00000444067 1693 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCN3P51790 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCN3P51790 RPS26P8-201ENST00000393490 348 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 RNA5SP317-201ENST00000410176 116 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 RNA5SP311-201ENST00000411290 116 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 SETP15-201ENST00000412724 337 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 RPL6P29-201ENST00000414863 865 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 OR5AW1P-201ENST00000426334 1006 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.78□□□□□ -1.64
CLCN3P51790 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLCN3P51790 AC243772.1-201ENST00000451620 410 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 VN1R32P-201ENST00000452234 905 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.78□□□□□ -1.64
CLCN3P51790 AC005912.1-201ENST00000495392 255 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.78□□□□□ -1.64
CLCN3P51790 AC008565.1-201ENST00000509046 885 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 AC104108.1-201ENST00000509930 412 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.78□□□□□ -1.64
CLCN3P51790 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCN3P51790 AC138938.1-201ENST00000515431 782 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 RNA5SP315-201ENST00000516340 116 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 RNA5SP312-201ENST00000517068 116 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.78□□□□□ -1.64
CLCN3P51790 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.78□□□□□ -1.64
CLCN3P51790 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.78□□□□□ -1.64
CLCN3P51790 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.78□□□□□ -1.64
CLCN3P51790 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.78□□□□□ -1.64
CLCN3P51790 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCN3P51790 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.78□□□□□ -1.64
CLCN3P51790 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCN3P51790 EIF1P6-201ENST00000600054 334 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 AL591034.3-201ENST00000605511 685 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 U6.48-201ENST00000618523 106 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 AC084824.4-201ENST00000620106 731 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCN3P51790 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.78□□□□□ -1.64
CLCN3P51790 OR6C71P-202ENST00000641886 1107 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCN3P51790 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.78□□□□□ -1.64
CLCN3P51790 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CLCN3P51790 RNF6P1-201ENST00000444889 1784 ntBASIC4.78□□□□□ -1.64
CLCN3P51790 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CLCN3P51790 CASC19-204ENST00000641001 2055 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.77□□□□□ -1.65
CLCN3P51790 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLCN3P51790 RNA5SP307-201ENST00000362863 116 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 RNA5SP175-201ENST00000364275 119 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 RN7SKP235-201ENST00000410662 305 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 SNORA74C-2-201ENST00000411179 201 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 AC012519.1-201ENST00000424588 610 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 AL157831.1-201ENST00000426134 473 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 OR4C10P-201ENST00000434991 931 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.77□□□□□ -1.65
CLCN3P51790 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.77□□□□□ -1.65
CLCN3P51790 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.77□□□□□ -1.65
CLCN3P51790 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.77□□□□□ -1.65
CLCN3P51790 AL031584.1-201ENST00000447169 754 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.77□□□□□ -1.65
CLCN3P51790 RPL7P22-201ENST00000466005 733 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 AC112206.1-201ENST00000468416 477 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.77□□□□□ -1.65
CLCN3P51790 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 AC098862.1-201ENST00000504991 413 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 AC010285.3-201ENST00000511668 676 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 AC026402.1-201ENST00000513642 170 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.77□□□□□ -1.65
CLCN3P51790 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.77□□□□□ -1.65
CLCN3P51790 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.77□□□□□ -1.65
CLCN3P51790 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.77□□□□□ -1.65
CLCN3P51790 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.77□□□□□ -1.65
CLCN3P51790 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.77□□□□□ -1.65
CLCN3P51790 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.77□□□□□ -1.65
CLCN3P51790 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.77□□□□□ -1.65
CLCN3P51790 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLCN3P51790 AL022067.1-201ENST00000602426 454 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 AC112220.2-201ENST00000605513 533 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 AL121890.2-201ENST00000617644 465 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CLCN3P51790 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.77□□□□□ -1.65
CLCN3P51790 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLCN3P51790 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLCN3P51790 PCAT14-202ENST00000627127 3935 ntBASIC4.77□□□□□ -1.65
CLCN3P51790 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLCN3P51790 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLCN3P51790 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.76□□□□□ -1.65
CLCN3P51790 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLCN3P51790 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLCN3P51790 RNU1-14P-201ENST00000362759 152 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 Y_RNA.126-201ENST00000363382 111 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLCN3P51790 RNU6-549P-201ENST00000384433 107 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 SNORD96B-201ENST00000386148 79 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 RN7SKP167-201ENST00000411047 285 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 RPS3AP25-201ENST00000411660 793 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 USP9YP21-201ENST00000420603 432 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 AL358176.3-201ENST00000420757 454 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms