Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.14□□□□□ -1.75
TNFSF9P41273 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.14□□□□□ -1.75
TNFSF9P41273 AC005344.1-201ENST00000613391 459 ntBASIC4.14□□□□□ -1.75
TNFSF9P41273 AC039056.2-201ENST00000622261 511 ntBASIC4.14□□□□□ -1.75
TNFSF9P41273 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.14□□□□□ -1.75
TNFSF9P41273 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TNFSF9P41273 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TNFSF9P41273 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.14□□□□□ -1.75
TNFSF9P41273 IPO8P1-201ENST00000455509 3109 ntBASIC4.14□□□□□ -1.75
TNFSF9P41273 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TNFSF9P41273 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TNFSF9P41273 AC027290.2-201ENST00000623210 18662 ntBASIC4.14□□□□□ -1.75
TNFSF9P41273 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFSF9P41273 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TNFSF9P41273 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFSF9P41273 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFSF9P41273 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.13□□□□□ -1.75
TNFSF9P41273 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFSF9P41273 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TNFSF9P41273 AL590704.1-201ENST00000402856 794 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 MTND2P15-201ENST00000418575 892 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFSF9P41273 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TNFSF9P41273 AL591419.1-201ENST00000427423 339 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 GOT2P5-201ENST00000433995 546 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFSF9P41273 ELOCP10-201ENST00000440624 327 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFSF9P41273 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFSF9P41273 EIF4A1P11-201ENST00000451239 222 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFSF9P41273 HMGN1P8-201ENST00000463578 288 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 AC022034.3-201ENST00000471393 478 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFSF9P41273 AC084198.1-201ENST00000477747 402 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFSF9P41273 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.13□□□□□ -1.75
TNFSF9P41273 AC147055.1-201ENST00000509261 750 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 AC108471.1-201ENST00000513977 287 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFSF9P41273 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.13□□□□□ -1.75
TNFSF9P41273 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TNFSF9P41273 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFSF9P41273 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFSF9P41273 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.13□□□□□ -1.75
TNFSF9P41273 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFSF9P41273 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.13□□□□□ -1.75
TNFSF9P41273 MIR4444-1-201ENST00000581696 74 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 MIR4444-2-201ENST00000584390 74 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 AC244505.7-201ENST00000599675 272 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 ELOCP34-201ENST00000604436 327 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.13□□□□□ -1.75
TNFSF9P41273 CR392039.5-201ENST00000623201 510 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 ATE1-AS1-202ENST00000636460 506 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFSF9P41273 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TNFSF9P41273 LINC02471-203ENST00000641941 4752 ntBASIC4.13□□□□□ -1.75
TNFSF9P41273 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFSF9P41273 AP004289.2-201ENST00000444413 1457 ntBASIC4.12□□□□□ -1.75
TNFSF9P41273 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFSF9P41273 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFSF9P41273 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TNFSF9P41273 SNORD3H-201ENST00000384486 214 ntBASIC4.12□□□□□ -1.75
TNFSF9P41273 RPL7P60-201ENST00000397636 735 ntBASIC4.12□□□□□ -1.75
TNFSF9P41273 ZNF602P-201ENST00000405929 924 ntBASIC4.12□□□□□ -1.75
TNFSF9P41273 JKAMPP1-201ENST00000413804 919 ntBASIC4.12□□□□□ -1.75
TNFSF9P41273 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.12□□□□□ -1.75
TNFSF9P41273 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.12□□□□□ -1.75
TNFSF9P41273 AC092447.2-201ENST00000435487 669 ntBASIC4.12□□□□□ -1.75
TNFSF9P41273 NOTCH2P1-201ENST00000443481 624 ntBASIC4.12□□□□□ -1.75
TNFSF9P41273 AC104629.2-201ENST00000468627 598 ntBASIC4.12□□□□□ -1.75
TNFSF9P41273 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
TNFSF9P41273 AC068714.1-201ENST00000559623 800 ntBASIC4.12□□□□□ -1.75
TNFSF9P41273 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.12□□□□□ -1.75
TNFSF9P41273 MRPS35P3-201ENST00000603189 709 ntBASIC4.12□□□□□ -1.75
TNFSF9P41273 AC123786.2-201ENST00000603459 275 ntBASIC4.12□□□□□ -1.75
TNFSF9P41273 SNORA62.6-201ENST00000606322 83 ntBASIC4.12□□□□□ -1.75
TNFSF9P41273 AC233309.1-201ENST00000619522 751 ntBASIC4.12□□□□□ -1.75
TNFSF9P41273 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.12□□□□□ -1.75
TNFSF9P41273 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFSF9P41273 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TNFSF9P41273 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TNFSF9P41273 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TNFSF9P41273 AC024560.2-201ENST00000507981 1497 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TNFSF9P41273 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TNFSF9P41273 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TNFSF9P41273 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFSF9P41273 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFSF9P41273 AC087565.3-202ENST00000642085 1603 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TNFSF9P41273 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.11□□□□□ -1.75
TNFSF9P41273 RNU6-225P-201ENST00000384613 103 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 AC240504.1-201ENST00000395709 845 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 SNORA57.3-201ENST00000411095 141 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 AC018644.1-201ENST00000429934 551 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 RPS20P1-201ENST00000434853 354 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 AL353597.2-202ENST00000434901 373 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 MTCYBP29-201ENST00000436327 1006 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms