Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RPS27P23-201ENST00000487608 251 ntBASIC4.69□□□□□ -1.66
HADHAP40939 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HADHAP40939 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.69□□□□□ -1.66
HADHAP40939 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.69□□□□□ -1.66
HADHAP40939 RNU6-488P-201ENST00000515918 99 ntBASIC4.69□□□□□ -1.66
HADHAP40939 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.69□□□□□ -1.66
HADHAP40939 NDUFS5P6-201ENST00000529136 295 ntBASIC4.69□□□□□ -1.66
HADHAP40939 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.69□□□□□ -1.66
HADHAP40939 AL110118.1-201ENST00000553543 400 ntBASIC4.69□□□□□ -1.66
HADHAP40939 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.69□□□□□ -1.66
HADHAP40939 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.69□□□□□ -1.66
HADHAP40939 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.69□□□□□ -1.66
HADHAP40939 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.69□□□□□ -1.66
HADHAP40939 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.69□□□□□ -1.66
HADHAP40939 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.69□□□□□ -1.66
HADHAP40939 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.69□□□□□ -1.66
HADHAP40939 RN7SL652P-201ENST00000577769 300 ntBASIC4.69□□□□□ -1.66
HADHAP40939 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.69□□□□□ -1.66
HADHAP40939 AC209154.1-201ENST00000582156 337 ntBASIC4.69□□□□□ -1.66
HADHAP40939 AC017100.2-201ENST00000584628 355 ntBASIC4.69□□□□□ -1.66
HADHAP40939 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.69□□□□□ -1.66
HADHAP40939 AC023762.1-201ENST00000603280 584 ntBASIC4.69□□□□□ -1.66
HADHAP40939 AC008966.2-201ENST00000606157 453 ntBASIC4.69□□□□□ -1.66
HADHAP40939 AL161616.1-201ENST00000611867 286 ntBASIC4.69□□□□□ -1.66
HADHAP40939 AC104763.3-201ENST00000613765 618 ntBASIC4.69□□□□□ -1.66
HADHAP40939 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.69□□□□□ -1.66
HADHAP40939 AC099654.9-201ENST00000637055 678 ntBASIC4.69□□□□□ -1.66
HADHAP40939 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HADHAP40939 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HADHAP40939 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HADHAP40939 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.69□□□□□ -1.66
HADHAP40939 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
HADHAP40939 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HADHAP40939 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HADHAP40939 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.69□□□□□ -1.66
HADHAP40939 AC138393.1-206ENST00000540997 1886 ntBASIC4.69□□□□□ -1.66
HADHAP40939 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.68□□□□□ -1.66
HADHAP40939 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HADHAP40939 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
HADHAP40939 AL355852.1-201ENST00000454081 1771 ntBASIC4.68□□□□□ -1.66
HADHAP40939 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.68□□□□□ -1.66
HADHAP40939 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HADHAP40939 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HADHAP40939 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HADHAP40939 RNU1-94P-201ENST00000362627 173 ntBASIC4.68□□□□□ -1.66
HADHAP40939 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HADHAP40939 MIR122-201ENST00000385044 85 ntBASIC4.68□□□□□ -1.66
HADHAP40939 CYB5AP4-201ENST00000396692 399 ntBASIC4.68□□□□□ -1.66
HADHAP40939 PRELID3BP11-201ENST00000414230 479 ntBASIC4.68□□□□□ -1.66
HADHAP40939 RPS7P9-201ENST00000414704 586 ntBASIC4.68□□□□□ -1.66
HADHAP40939 AC140479.3-201ENST00000418944 1126 ntBASIC4.68□□□□□ -1.66
HADHAP40939 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.68□□□□□ -1.66
HADHAP40939 AC013410.2-201ENST00000422627 201 ntBASIC4.68□□□□□ -1.66
HADHAP40939 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.68□□□□□ -1.66
HADHAP40939 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.68□□□□□ -1.66
HADHAP40939 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.68□□□□□ -1.66
HADHAP40939 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.68□□□□□ -1.66
HADHAP40939 NDUFS5P3-201ENST00000450668 321 ntBASIC4.68□□□□□ -1.66
HADHAP40939 AC244505.3-201ENST00000454598 187 ntBASIC4.68□□□□□ -1.66
HADHAP40939 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.68□□□□□ -1.66
HADHAP40939 NAP1L1P3-201ENST00000462291 880 ntBASIC4.68□□□□□ -1.66
HADHAP40939 AC011005.3-201ENST00000491624 395 ntBASIC4.68□□□□□ -1.66
HADHAP40939 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.68□□□□□ -1.66
HADHAP40939 AC005351.1-201ENST00000511152 786 ntBASIC4.68□□□□□ -1.66
HADHAP40939 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.68□□□□□ -1.66
HADHAP40939 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.68□□□□□ -1.66
HADHAP40939 AF279873.1-201ENST00000523393 313 ntBASIC4.68□□□□□ -1.66
HADHAP40939 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.68□□□□□ -1.66
HADHAP40939 LRRC6P1-201ENST00000532188 885 ntBASIC4.68□□□□□ -1.66
HADHAP40939 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.68□□□□□ -1.66
HADHAP40939 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.68□□□□□ -1.66
HADHAP40939 AC137768.1-201ENST00000549998 553 ntBASIC4.68□□□□□ -1.66
HADHAP40939 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.68□□□□□ -1.66
HADHAP40939 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.68□□□□□ -1.66
HADHAP40939 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.68□□□□□ -1.66
HADHAP40939 NIFKP8-201ENST00000560500 874 ntBASIC4.68□□□□□ -1.66
HADHAP40939 MIR4330-201ENST00000579077 105 ntBASIC4.68□□□□□ -1.66
HADHAP40939 MIR4666A-201ENST00000580160 79 ntBASIC4.68□□□□□ -1.66
HADHAP40939 AC067852.4-201ENST00000590314 478 ntBASIC4.68□□□□□ -1.66
HADHAP40939 AL022067.1-201ENST00000602426 454 ntBASIC4.68□□□□□ -1.66
HADHAP40939 AC069304.3-201ENST00000603938 1084 ntBASIC4.68□□□□□ -1.66
HADHAP40939 AC073387.2-201ENST00000604797 784 ntBASIC4.68□□□□□ -1.66
HADHAP40939 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.68□□□□□ -1.66
HADHAP40939 MIR6780A-201ENST00000615089 68 ntBASIC4.68□□□□□ -1.66
HADHAP40939 VN1R7P-201ENST00000619242 903 ntBASIC4.68□□□□□ -1.66
HADHAP40939 MIR6853-201ENST00000619642 74 ntBASIC4.68□□□□□ -1.66
HADHAP40939 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.68□□□□□ -1.66
HADHAP40939 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HADHAP40939 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.68□□□□□ -1.66
HADHAP40939 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.68□□□□□ -1.66
HADHAP40939 AC099654.8-201ENST00000637757 681 ntBASIC4.68□□□□□ -1.66
HADHAP40939 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HADHAP40939 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.68□□□□□ -1.66
HADHAP40939 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HADHAP40939 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.68□□□□□ -1.66
HADHAP40939 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HADHAP40939 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
HADHAP40939 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.68□□□□□ -1.66
HADHAP40939 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HADHAP40939 ERCC6-202ENST00000374127 1782 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms