Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 KPNA2P2-201ENST00000419546 1489 ntBASIC4.17□□□□□ -1.74
HOXA9P31269 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
HOXA9P31269 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA9P31269 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA9P31269 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA9P31269 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
HOXA9P31269 MIR208A-201ENST00000362287 71 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 SNORA63.1-201ENST00000362493 131 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 SNORD46.1-201ENST00000364139 104 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA9P31269 MIR7-3-201ENST00000384898 110 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 MIR513A2-201ENST00000385249 127 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 CRYBB2P1-203ENST00000415709 538 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA9P31269 RPL23AP4-201ENST00000427757 463 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 MTCO1P54-201ENST00000430139 712 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA9P31269 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA9P31269 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA9P31269 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA9P31269 AL645939.1-201ENST00000453429 797 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 MTCYBP14-201ENST00000457471 715 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA9P31269 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA9P31269 AC006499.6-201ENST00000511169 607 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 RNU4-18P-201ENST00000516751 149 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA9P31269 AC025857.1-201ENST00000525252 377 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA9P31269 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA9P31269 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA9P31269 AL139286.1-201ENST00000604465 483 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 AC138473.1-201ENST00000605717 526 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 MIR432-201ENST00000606207 94 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 AC005972.3-201ENST00000606304 481 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 SNORA35B-201ENST00000607417 129 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 AL031666.3-201ENST00000609320 1006 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 AC000123.2-201ENST00000623124 461 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA9P31269 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA9P31269 AP002001.2-201ENST00000529025 1469 ntBASIC4.16□□□□□ -1.74
HOXA9P31269 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXA9P31269 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXA9P31269 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.15□□□□□ -1.74
HOXA9P31269 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HOXA9P31269 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.15□□□□□ -1.74
HOXA9P31269 MIR448-201ENST00000362131 111 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 RNA5SP399-201ENST00000364003 117 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 U8.11-201ENST00000384699 133 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 U8.12-201ENST00000384701 133 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 LAP3P1-201ENST00000403648 294 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.15□□□□□ -1.75
HOXA9P31269 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXA9P31269 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA9P31269 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXA9P31269 AC092647.1-201ENST00000420654 287 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 AC093084.1-201ENST00000424233 687 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.15□□□□□ -1.75
HOXA9P31269 HIGD1AP4-201ENST00000430194 280 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HOXA9P31269 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA9P31269 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA9P31269 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXA9P31269 U8.18-201ENST00000459285 133 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 RPL21P11-201ENST00000461458 483 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HOXA9P31269 AC006499.5-201ENST00000505037 514 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXA9P31269 AC093853.1-201ENST00000515689 483 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 RNU1-95P-201ENST00000516357 160 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 RNU1-128P-201ENST00000516704 160 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA9P31269 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA9P31269 AC090281.1-201ENST00000523019 276 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXA9P31269 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
HOXA9P31269 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXA9P31269 CCNG2P1-201ENST00000549521 1000 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.15□□□□□ -1.75
HOXA9P31269 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HOXA9P31269 AC068714.1-201ENST00000559623 800 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 CYP4A43P-201ENST00000568156 121 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA9P31269 AC008638.3-201ENST00000603341 463 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 AL139395.1-201ENST00000603662 160 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 AC010680.3-201ENST00000604215 520 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 AC010200.2-201ENST00000605098 235 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 AC078899.5-201ENST00000612475 178 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 AL139089.1-201ENST00000620372 975 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXA9P31269 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXA9P31269 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXA9P31269 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
HOXA9P31269 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HOXA9P31269 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HOXA9P31269 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HOXA9P31269 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
HOXA9P31269 AL627171.1-201ENST00000618845 1308 ntBASIC4.15□□□□□ -1.75
HOXA9P31269 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXA9P31269 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms