Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SNORA51.6-201ENST00000384151 125 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 AC009804.1-201ENST00000400949 179 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 DHFRP6-201ENST00000401776 268 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 RNU6ATAC25P-201ENST00000408798 117 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 HMGN1P14-201ENST00000412459 517 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 OR8G2P-201ENST00000412796 908 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ERCC3P19447 FNDC3CP-201ENST00000420795 1155 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC6.58□□□□□ -1.36
ERCC3P19447 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.58□□□□□ -1.36
ERCC3P19447 AC092651.1-201ENST00000426110 312 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 AL356583.2-201ENST00000426536 280 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.58□□□□□ -1.36
ERCC3P19447 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.58□□□□□ -1.36
ERCC3P19447 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ERCC3P19447 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.58□□□□□ -1.36
ERCC3P19447 AC091862.1-201ENST00000438016 1100 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.58□□□□□ -1.36
ERCC3P19447 PTMAP6-201ENST00000439110 327 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 APOOP2-201ENST00000461561 539 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 AC090142.1-201ENST00000465776 462 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 AC104763.1-201ENST00000475274 360 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC6.58□□□□□ -1.36
ERCC3P19447 RPL9P33-201ENST00000484311 566 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.58□□□□□ -1.36
ERCC3P19447 AC006499.3-201ENST00000506077 748 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC6.58□□□□□ -1.36
ERCC3P19447 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC6.58□□□□□ -1.36
ERCC3P19447 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.58□□□□□ -1.36
ERCC3P19447 RNA5SP228-201ENST00000516232 133 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.58□□□□□ -1.36
ERCC3P19447 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC6.58□□□□□ -1.36
ERCC3P19447 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.58□□□□□ -1.36
ERCC3P19447 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.58□□□□□ -1.36
ERCC3P19447 AL121834.1-201ENST00000572284 509 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC6.58□□□□□ -1.36
ERCC3P19447 MIR4528-201ENST00000577763 90 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 MIR544B-201ENST00000582372 78 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ERCC3P19447 AC005191.1-201ENST00000603950 358 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 AC092794.1-201ENST00000612734 582 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 U6atac.1-201ENST00000616025 117 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ERCC3P19447 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.58□□□□□ -1.36
ERCC3P19447 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.58□□□□□ -1.36
ERCC3P19447 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.58□□□□□ -1.36
ERCC3P19447 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ERCC3P19447 AC079097.1-201ENST00000512187 1399 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC3P19447 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC3P19447 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC3P19447 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.57□□□□□ -1.36
ERCC3P19447 DNM1P47-203ENST00000571780 12667 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.57□□□□□ -1.36
ERCC3P19447 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
ERCC3P19447 OR11H5P-202ENST00000641612 1325 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC3P19447 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
ERCC3P19447 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC3P19447 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC3P19447 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.57□□□□□ -1.36
ERCC3P19447 SNORA70-201ENST00000384436 135 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 ARF4P3-201ENST00000397387 509 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 AL031679.1-201ENST00000400616 525 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 AC136624.1-201ENST00000400791 413 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 SSXP10-201ENST00000402595 565 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 RN7SKP33-201ENST00000410942 340 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.57□□□□□ -1.36
ERCC3P19447 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.57□□□□□ -1.36
ERCC3P19447 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC6.57□□□□□ -1.36
ERCC3P19447 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC3P19447 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC6.57□□□□□ -1.36
ERCC3P19447 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.57□□□□□ -1.36
ERCC3P19447 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.57□□□□□ -1.36
ERCC3P19447 GAPDHP58-201ENST00000438477 1006 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC6.57□□□□□ -1.36
ERCC3P19447 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC6.57□□□□□ -1.36
ERCC3P19447 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC3P19447 OR7E116P-201ENST00000448529 957 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 SNRPFP4-201ENST00000456366 242 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 OR6K1P-201ENST00000456766 971 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 RN7SL583P-201ENST00000475692 287 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 RN7SL30P-201ENST00000488416 306 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 AC008953.1-201ENST00000497334 318 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.57□□□□□ -1.36
ERCC3P19447 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC3P19447 AC002456.2-201ENST00000509356 380 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 AC110792.2-201ENST00000510278 224 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 AC104986.1-201ENST00000517978 436 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.57□□□□□ -1.36
ERCC3P19447 AC016957.1-201ENST00000534895 309 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
ERCC3P19447 HSPE1P3-201ENST00000559254 309 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 MRPS21P7-201ENST00000566937 238 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.57□□□□□ -1.36
ERCC3P19447 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC3P19447 AC019322.1-201ENST00000571869 389 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.57□□□□□ -1.36
ERCC3P19447 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.57□□□□□ -1.36
ERCC3P19447 AP000403.1-201ENST00000603349 851 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms