Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.37□□□□□ -1.71
VCLP18206 RNU1-15P-201ENST00000353977 144 ntBASIC4.37□□□□□ -1.71
VCLP18206 RNA5SP307-201ENST00000362863 116 ntBASIC4.37□□□□□ -1.71
VCLP18206 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
VCLP18206 MIR3065-201ENST00000390137 79 ntBASIC4.37□□□□□ -1.71
VCLP18206 AC092745.2-202ENST00000411880 369 ntBASIC4.37□□□□□ -1.71
VCLP18206 MTND2P15-201ENST00000418575 892 ntBASIC4.37□□□□□ -1.71
VCLP18206 RPL18P10-201ENST00000425606 538 ntBASIC4.37□□□□□ -1.71
VCLP18206 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.37□□□□□ -1.71
VCLP18206 CDY14P-201ENST00000431260 1014 ntBASIC4.37□□□□□ -1.71
VCLP18206 MTCO1P43-201ENST00000431831 488 ntBASIC4.37□□□□□ -1.71
VCLP18206 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.37□□□□□ -1.71
VCLP18206 AL512661.1-201ENST00000434586 1253 ntBASIC4.37□□□□□ -1.71
VCLP18206 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.37□□□□□ -1.71
VCLP18206 CDY12P-201ENST00000440679 1015 ntBASIC4.37□□□□□ -1.71
VCLP18206 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.37□□□□□ -1.71
VCLP18206 CDY13P-201ENST00000445813 1015 ntBASIC4.37□□□□□ -1.71
VCLP18206 PHBP16-201ENST00000446318 950 ntBASIC4.37□□□□□ -1.71
VCLP18206 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VCLP18206 RPL7P31-201ENST00000450192 724 ntBASIC4.37□□□□□ -1.71
VCLP18206 NDUFS5P3-201ENST00000450668 321 ntBASIC4.37□□□□□ -1.71
VCLP18206 CDY23P-201ENST00000451661 1014 ntBASIC4.37□□□□□ -1.71
VCLP18206 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.37□□□□□ -1.71
VCLP18206 RN7SKP283-201ENST00000517197 270 ntBASIC4.37□□□□□ -1.71
VCLP18206 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.37□□□□□ -1.71
VCLP18206 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VCLP18206 IGLVIV-53-201ENST00000520107 367 ntBASIC4.37□□□□□ -1.71
VCLP18206 AC010306.1-201ENST00000523223 1117 ntBASIC4.37□□□□□ -1.71
VCLP18206 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.37□□□□□ -1.71
VCLP18206 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.37□□□□□ -1.71
VCLP18206 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.37□□□□□ -1.71
VCLP18206 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.37□□□□□ -1.71
VCLP18206 AC090312.2-201ENST00000582687 378 ntBASIC4.37□□□□□ -1.71
VCLP18206 NTAN1P1-201ENST00000603150 646 ntBASIC4.37□□□□□ -1.71
VCLP18206 RPL21P136-201ENST00000605378 396 ntBASIC4.37□□□□□ -1.71
VCLP18206 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VCLP18206 AL138721.1-201ENST00000616756 179 ntBASIC4.37□□□□□ -1.71
VCLP18206 AC000123.2-201ENST00000623124 461 ntBASIC4.37□□□□□ -1.71
VCLP18206 AC007546.2-201ENST00000623996 360 ntBASIC4.37□□□□□ -1.71
VCLP18206 MIR6715B-201ENST00000637172 77 ntBASIC4.37□□□□□ -1.71
VCLP18206 AC132825.7-201ENST00000638744 335 ntBASIC4.37□□□□□ -1.71
VCLP18206 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VCLP18206 MFSD8-213ENST00000641134 1327 ntBASIC4.37□□□□□ -1.71
VCLP18206 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VCLP18206 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
VCLP18206 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
VCLP18206 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.37□□□□□ -1.71
VCLP18206 PNPT1P2-201ENST00000456768 2050 ntBASIC4.36□□□□□ -1.71
VCLP18206 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
VCLP18206 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VCLP18206 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VCLP18206 ENSAP3-201ENST00000312710 333 ntBASIC4.36□□□□□ -1.71
VCLP18206 OR4K17-201ENST00000315543 1032 ntBASIC4.36□□□□□ -1.71
VCLP18206 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VCLP18206 RNU6-543P-201ENST00000362576 108 ntBASIC4.36□□□□□ -1.71
VCLP18206 MIR141-201ENST00000384975 95 ntBASIC4.36□□□□□ -1.71
VCLP18206 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
VCLP18206 HNRNPDP2-201ENST00000406475 478 ntBASIC4.36□□□□□ -1.71
VCLP18206 RNU2-6P-201ENST00000411404 190 ntBASIC4.36□□□□□ -1.71
VCLP18206 TMSB10P2-201ENST00000416049 131 ntBASIC4.36□□□□□ -1.71
VCLP18206 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.36□□□□□ -1.71
VCLP18206 AC073335.1-201ENST00000427776 363 ntBASIC4.36□□□□□ -1.71
VCLP18206 YWHAEP5-201ENST00000431545 765 ntBASIC4.36□□□□□ -1.71
VCLP18206 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.36□□□□□ -1.71
VCLP18206 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.36□□□□□ -1.71
VCLP18206 AC009220.1-201ENST00000451614 275 ntBASIC4.36□□□□□ -1.71
VCLP18206 RPL21P47-201ENST00000483696 477 ntBASIC4.36□□□□□ -1.71
VCLP18206 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.36□□□□□ -1.71
VCLP18206 AC146944.2-203ENST00000502493 354 ntBASIC4.36□□□□□ -1.71
VCLP18206 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.36□□□□□ -1.71
VCLP18206 AC104108.1-201ENST00000509930 412 ntBASIC4.36□□□□□ -1.71
VCLP18206 AC139495.1-202ENST00000513164 354 ntBASIC4.36□□□□□ -1.71
VCLP18206 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.36□□□□□ -1.71
VCLP18206 HMGB1P23-201ENST00000518743 568 ntBASIC4.36□□□□□ -1.71
VCLP18206 AC083923.1-201ENST00000523708 376 ntBASIC4.36□□□□□ -1.71
VCLP18206 C1DP5-201ENST00000525775 383 ntBASIC4.36□□□□□ -1.71
VCLP18206 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.36□□□□□ -1.71
VCLP18206 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.36□□□□□ -1.71
VCLP18206 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.36□□□□□ -1.71
VCLP18206 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.36□□□□□ -1.71
VCLP18206 AL031666.3-201ENST00000609320 1006 ntBASIC4.36□□□□□ -1.71
VCLP18206 FRG1HP-204ENST00000617940 757 ntBASIC4.36□□□□□ -1.71
VCLP18206 uc_338.13-201ENST00000618243 179 ntBASIC4.36□□□□□ -1.71
VCLP18206 AP006248.2-201ENST00000623309 592 ntBASIC4.36□□□□□ -1.71
VCLP18206 AL590396.2-201ENST00000636511 1041 ntBASIC4.36□□□□□ -1.71
VCLP18206 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.36□□□□□ -1.71
VCLP18206 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VCLP18206 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VCLP18206 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VCLP18206 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.36□□□□□ -1.71
VCLP18206 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VCLP18206 SAGE2P-201ENST00000420011 2126 ntBASIC4.36□□□□□ -1.71
VCLP18206 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.36□□□□□ -1.71
VCLP18206 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.35□□□□□ -1.71
VCLP18206 Z73965.1-201ENST00000623412 2297 ntBASIC4.35□□□□□ -1.71
VCLP18206 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.35□□□□□ -1.71
VCLP18206 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
VCLP18206 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
VCLP18206 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VCLP18206 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms