Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 COX6CP4-201ENST00000605798 228 ntBASIC4.88□□□□□ -1.63
MMP3P08254 OR2BH1P-201ENST00000608850 864 ntBASIC4.88□□□□□ -1.63
MMP3P08254 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
MMP3P08254 AC024023.1-201ENST00000624530 922 ntBASIC4.88□□□□□ -1.63
MMP3P08254 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
MMP3P08254 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
MMP3P08254 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.88□□□□□ -1.63
MMP3P08254 AC099786.3-201ENST00000565735 1410 ntBASIC4.88□□□□□ -1.63
MMP3P08254 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.88□□□□□ -1.63
MMP3P08254 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
MMP3P08254 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
MMP3P08254 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.87□□□□□ -1.63
MMP3P08254 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
MMP3P08254 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.87□□□□□ -1.63
MMP3P08254 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
MMP3P08254 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
MMP3P08254 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
MMP3P08254 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
MMP3P08254 RNU6-666P-201ENST00000363499 107 ntBASIC4.87□□□□□ -1.63
MMP3P08254 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
MMP3P08254 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
MMP3P08254 AL359837.1-201ENST00000381357 287 ntBASIC4.87□□□□□ -1.63
MMP3P08254 Y_RNA.472-201ENST00000384322 102 ntBASIC4.87□□□□□ -1.63
MMP3P08254 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
MMP3P08254 AC097374.1-203ENST00000400783 485 ntBASIC4.87□□□□□ -1.63
MMP3P08254 AL136131.1-201ENST00000406079 803 ntBASIC4.87□□□□□ -1.63
MMP3P08254 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.87□□□□□ -1.63
MMP3P08254 AC013404.1-201ENST00000413068 249 ntBASIC4.87□□□□□ -1.63
MMP3P08254 LINC01881-201ENST00000416103 412 ntBASIC4.87□□□□□ -1.63
MMP3P08254 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.87□□□□□ -1.63
MMP3P08254 MTCO2P21-201ENST00000419780 677 ntBASIC4.87□□□□□ -1.63
MMP3P08254 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.87□□□□□ -1.63
MMP3P08254 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.87□□□□□ -1.63
MMP3P08254 HMGN2P27-201ENST00000427352 270 ntBASIC4.87□□□□□ -1.63
MMP3P08254 BMS1P19-201ENST00000433925 393 ntBASIC4.87□□□□□ -1.63
MMP3P08254 AL132765.1-201ENST00000434165 553 ntBASIC4.87□□□□□ -1.63
MMP3P08254 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.87□□□□□ -1.63
MMP3P08254 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.87□□□□□ -1.63
MMP3P08254 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.87□□□□□ -1.63
MMP3P08254 RPL34P26-201ENST00000445636 354 ntBASIC4.87□□□□□ -1.63
MMP3P08254 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.87□□□□□ -1.63
MMP3P08254 EEF1A1P1-201ENST00000447052 739 ntBASIC4.87□□□□□ -1.63
MMP3P08254 AC069304.1-201ENST00000491593 704 ntBASIC4.87□□□□□ -1.63
MMP3P08254 RPS27AP13-201ENST00000498403 237 ntBASIC4.87□□□□□ -1.63
MMP3P08254 BOLA3P3-201ENST00000505182 232 ntBASIC4.87□□□□□ -1.63
MMP3P08254 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.87□□□□□ -1.63
MMP3P08254 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.87□□□□□ -1.63
MMP3P08254 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.87□□□□□ -1.63
MMP3P08254 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.87□□□□□ -1.63
MMP3P08254 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.87□□□□□ -1.63
MMP3P08254 AC138832.1-201ENST00000522871 556 ntBASIC4.87□□□□□ -1.63
MMP3P08254 LRRC6P1-201ENST00000532188 885 ntBASIC4.87□□□□□ -1.63
MMP3P08254 AC023538.1-201ENST00000534576 736 ntBASIC4.87□□□□□ -1.63
MMP3P08254 OR8R1P-201ENST00000543943 764 ntBASIC4.87□□□□□ -1.63
MMP3P08254 AL359219.2-201ENST00000555184 348 ntBASIC4.87□□□□□ -1.63
MMP3P08254 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.87□□□□□ -1.63
MMP3P08254 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.87□□□□□ -1.63
MMP3P08254 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.87□□□□□ -1.63
MMP3P08254 AL161729.3-201ENST00000603533 673 ntBASIC4.87□□□□□ -1.63
MMP3P08254 AC024060.1-201ENST00000607052 494 ntBASIC4.87□□□□□ -1.63
MMP3P08254 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.87□□□□□ -1.63
MMP3P08254 AC013468.1-201ENST00000608680 598 ntBASIC4.87□□□□□ -1.63
MMP3P08254 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.87□□□□□ -1.63
MMP3P08254 AP000484.1-201ENST00000620067 1252 ntBASIC4.87□□□□□ -1.63
MMP3P08254 AC008785.1-201ENST00000624475 456 ntBASIC4.87□□□□□ -1.63
MMP3P08254 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.87□□□□□ -1.63
MMP3P08254 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.87□□□□□ -1.63
MMP3P08254 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
MMP3P08254 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.87□□□□□ -1.63
MMP3P08254 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
MMP3P08254 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
MMP3P08254 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
MMP3P08254 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
MMP3P08254 AL606537.1-201ENST00000607258 2011 ntBASIC4.87□□□□□ -1.63
MMP3P08254 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
MMP3P08254 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.87□□□□□ -1.63
MMP3P08254 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.86□□□□□ -1.63
MMP3P08254 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.86□□□□□ -1.63
MMP3P08254 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.86□□□□□ -1.63
MMP3P08254 AC093775.1-201ENST00000624154 1868 ntBASIC4.86□□□□□ -1.63
MMP3P08254 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.86□□□□□ -1.63
MMP3P08254 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.86□□□□□ -1.63
MMP3P08254 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MMP3P08254 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.86□□□□□ -1.63
MMP3P08254 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
MMP3P08254 RNU4-44P-201ENST00000363050 141 ntBASIC4.86□□□□□ -1.63
MMP3P08254 RN7SKP280-201ENST00000364196 304 ntBASIC4.86□□□□□ -1.63
MMP3P08254 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
MMP3P08254 AL445189.1-201ENST00000405722 338 ntBASIC4.86□□□□□ -1.63
MMP3P08254 EIF4A1P3-201ENST00000411521 244 ntBASIC4.86□□□□□ -1.63
MMP3P08254 TAF13P2-201ENST00000416876 286 ntBASIC4.86□□□□□ -1.63
MMP3P08254 MTND4P3-201ENST00000417829 541 ntBASIC4.86□□□□□ -1.63
MMP3P08254 C1DP1-201ENST00000426049 402 ntBASIC4.86□□□□□ -1.63
MMP3P08254 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.86□□□□□ -1.63
MMP3P08254 ZNF886P-201ENST00000450781 723 ntBASIC4.86□□□□□ -1.63
MMP3P08254 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.86□□□□□ -1.63
MMP3P08254 AL035407.2-201ENST00000454090 378 ntBASIC4.86□□□□□ -1.63
MMP3P08254 MTCO2P6-201ENST00000463134 685 ntBASIC4.86□□□□□ -1.63
MMP3P08254 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
MMP3P08254 RPL21P131-201ENST00000497298 483 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms