Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL138787.1-202ENST00000437804 898 ntBASIC3.75□□□□□ -1.81
HLA-DQB2P05538 MTND6P32-201ENST00000457611 483 ntBASIC3.75□□□□□ -1.81
HLA-DQB2P05538 AC114982.2-201ENST00000461396 358 ntBASIC3.75□□□□□ -1.81
HLA-DQB2P05538 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DQB2P05538 AC091959.2-201ENST00000477363 321 ntBASIC3.75□□□□□ -1.81
HLA-DQB2P05538 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DQB2P05538 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.75□□□□□ -1.81
HLA-DQB2P05538 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DQB2P05538 NARSP2-201ENST00000518524 679 ntBASIC3.75□□□□□ -1.81
HLA-DQB2P05538 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DQB2P05538 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DQB2P05538 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DQB2P05538 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DQB2P05538 AC107016.1-201ENST00000550463 337 ntBASIC3.75□□□□□ -1.81
HLA-DQB2P05538 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DQB2P05538 TRAV15-201ENST00000556680 249 ntBASIC3.75□□□□□ -1.81
HLA-DQB2P05538 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.75□□□□□ -1.81
HLA-DQB2P05538 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DQB2P05538 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DQB2P05538 AP003072.5-201ENST00000623872 773 ntBASIC3.75□□□□□ -1.81
HLA-DQB2P05538 AP000553.6-201ENST00000641242 118 ntBASIC3.75□□□□□ -1.81
HLA-DQB2P05538 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
HLA-DQB2P05538 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DQB2P05538 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DQB2P05538 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DQB2P05538 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.74□□□□□ -1.81
HLA-DQB2P05538 MFSD8-236ENST00000641509 4050 ntBASIC3.74□□□□□ -1.81
HLA-DQB2P05538 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 AC007066.1-201ENST00000392902 381 ntBASIC3.74□□□□□ -1.81
HLA-DQB2P05538 CYCSP19-201ENST00000411715 316 ntBASIC3.74□□□□□ -1.81
HLA-DQB2P05538 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 AC244033.1-201ENST00000426826 870 ntBASIC3.74□□□□□ -1.81
HLA-DQB2P05538 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 HMGB3P5-201ENST00000428894 612 ntBASIC3.74□□□□□ -1.81
HLA-DQB2P05538 AL445584.1-201ENST00000431451 330 ntBASIC3.74□□□□□ -1.81
HLA-DQB2P05538 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 AL133477.1-201ENST00000457472 514 ntBASIC3.74□□□□□ -1.81
HLA-DQB2P05538 AC007688.1-201ENST00000475592 759 ntBASIC3.74□□□□□ -1.81
HLA-DQB2P05538 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 AC099489.2-201ENST00000574976 260 ntBASIC3.74□□□□□ -1.81
HLA-DQB2P05538 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DQB2P05538 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 AC074029.4-201ENST00000624796 1859 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 Y_RNA.126-201ENST00000363382 111 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 SNORD3H-201ENST00000384486 214 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 AC099563.1-201ENST00000456086 418 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 AC010307.1-201ENST00000467206 836 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 UBE2CP3-201ENST00000502715 450 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 AC008489.1-201ENST00000524271 483 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 AC023161.2-201ENST00000551218 780 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 KLKP1-201ENST00000595979 403 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 AC020914.4-201ENST00000597690 277 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 AL049634.3-201ENST00000604968 457 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 AC016252.1-201ENST00000609721 474 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 OR6C71P-202ENST00000641886 1107 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 ASNSP1-204ENST00000641977 1664 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 AC083899.2-201ENST00000423285 1376 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DQB2P05538 CASC19-284ENST00000642142 1868 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 SAGE2P-201ENST00000420011 2126 ntBASIC3.73□□□□□ -1.81
HLA-DQB2P05538 FAM35DP-201ENST00000323387 2712 ntBASIC3.72□□□□□ -1.81
HLA-DQB2P05538 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 MAPK10-372ENST00000641954 3413 ntBASIC3.72□□□□□ -1.81
HLA-DQB2P05538 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 ASNSP1-201ENST00000518311 1939 ntBASIC3.72□□□□□ -1.81
HLA-DQB2P05538 CR381670.1-201ENST00000624291 1693 ntBASIC3.72□□□□□ -1.81
HLA-DQB2P05538 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 AC104297.1-201ENST00000393779 870 ntBASIC3.72□□□□□ -1.81
HLA-DQB2P05538 AC098592.2-201ENST00000413158 265 ntBASIC3.72□□□□□ -1.81
HLA-DQB2P05538 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 SKP1P1-201ENST00000438081 489 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms