Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.55□□□□□ -1.68
COL2A1P02458 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.55□□□□□ -1.68
COL2A1P02458 AC068020.1-201ENST00000594215 661 ntBASIC4.55□□□□□ -1.68
COL2A1P02458 ZNF92P2-201ENST00000600543 1059 ntBASIC4.55□□□□□ -1.68
COL2A1P02458 AC242628.1-201ENST00000606810 391 ntBASIC4.55□□□□□ -1.68
COL2A1P02458 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.55□□□□□ -1.68
COL2A1P02458 AC084782.3-201ENST00000612282 578 ntBASIC4.55□□□□□ -1.68
COL2A1P02458 AC104763.3-201ENST00000613765 618 ntBASIC4.55□□□□□ -1.68
COL2A1P02458 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
COL2A1P02458 AC097504.1-201ENST00000515103 2415 ntBASIC4.54□□□□□ -1.68
COL2A1P02458 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
COL2A1P02458 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.54□□□□□ -1.68
COL2A1P02458 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL2A1P02458 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
COL2A1P02458 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.54□□□□□ -1.68
COL2A1P02458 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL2A1P02458 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.54□□□□□ -1.68
COL2A1P02458 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL2A1P02458 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
COL2A1P02458 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL2A1P02458 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.54□□□□□ -1.68
COL2A1P02458 ATP5F1P6-201ENST00000402768 767 ntBASIC4.54□□□□□ -1.68
COL2A1P02458 ATP5A1P2-201ENST00000412323 255 ntBASIC4.54□□□□□ -1.68
COL2A1P02458 RPL6P21-201ENST00000418672 846 ntBASIC4.54□□□□□ -1.68
COL2A1P02458 AL158053.1-201ENST00000441503 453 ntBASIC4.54□□□□□ -1.68
COL2A1P02458 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.54□□□□□ -1.68
COL2A1P02458 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.54□□□□□ -1.68
COL2A1P02458 TVP23BP2-201ENST00000455082 615 ntBASIC4.54□□□□□ -1.68
COL2A1P02458 RPL6P9-201ENST00000466502 859 ntBASIC4.54□□□□□ -1.68
COL2A1P02458 HMGN1P15-201ENST00000513870 295 ntBASIC4.54□□□□□ -1.68
COL2A1P02458 TCP11X3P-202ENST00000514289 1254 ntBASIC4.54□□□□□ -1.68
COL2A1P02458 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.54□□□□□ -1.68
COL2A1P02458 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.54□□□□□ -1.68
COL2A1P02458 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.54□□□□□ -1.68
COL2A1P02458 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.54□□□□□ -1.68
COL2A1P02458 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.54□□□□□ -1.68
COL2A1P02458 AL353600.1-201ENST00000608148 251 ntBASIC4.54□□□□□ -1.68
COL2A1P02458 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.54□□□□□ -1.68
COL2A1P02458 AC095038.2-201ENST00000621464 1070 ntBASIC4.54□□□□□ -1.68
COL2A1P02458 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL2A1P02458 AC006484.1-201ENST00000435086 1884 ntBASIC4.54□□□□□ -1.68
COL2A1P02458 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.54□□□□□ -1.68
COL2A1P02458 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL2A1P02458 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
COL2A1P02458 AC092435.4-201ENST00000623012 4159 ntBASIC4.54□□□□□ -1.68
COL2A1P02458 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.54□□□□□ -1.68
COL2A1P02458 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.53□□□□□ -1.68
COL2A1P02458 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL2A1P02458 AC125336.1-201ENST00000508893 2827 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.53□□□□□ -1.68
COL2A1P02458 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL2A1P02458 AC093591.2-201ENST00000565254 3843 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.53□□□□□ -1.68
COL2A1P02458 USP8P1-201ENST00000494673 3183 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL2A1P02458 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.53□□□□□ -1.68
COL2A1P02458 GSTM3P2-201ENST00000412746 530 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL2A1P02458 HSPE1P16-201ENST00000426640 348 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL2A1P02458 PPIAP3-201ENST00000450588 505 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.53□□□□□ -1.68
COL2A1P02458 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.53□□□□□ -1.68
COL2A1P02458 AC015908.1-201ENST00000478739 476 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 SETP6-201ENST00000479329 568 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 AC082651.2-201ENST00000496833 166 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 ARL4AP1-201ENST00000503220 705 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.53□□□□□ -1.68
COL2A1P02458 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.53□□□□□ -1.68
COL2A1P02458 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.53□□□□□ -1.68
COL2A1P02458 OR8K2P-201ENST00000524645 927 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.53□□□□□ -1.68
COL2A1P02458 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.53□□□□□ -1.68
COL2A1P02458 AL136520.1-202ENST00000555494 763 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 AL121594.4-201ENST00000556211 1196 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.53□□□□□ -1.68
COL2A1P02458 AL031985.2-201ENST00000600955 480 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 AC025165.5-201ENST00000602802 578 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 AC096947.1-201ENST00000603233 470 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 AL161912.3-201ENST00000605404 628 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.53□□□□□ -1.68
COL2A1P02458 AC016957.2-201ENST00000616998 848 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
COL2A1P02458 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL2A1P02458 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.53□□□□□ -1.68
COL2A1P02458 AC009229.4-201ENST00000623854 1947 ntBASIC4.53□□□□□ -1.68
COL2A1P02458 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
COL2A1P02458 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
COL2A1P02458 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
COL2A1P02458 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL2A1P02458 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
COL2A1P02458 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL2A1P02458 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
COL2A1P02458 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL2A1P02458 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL2A1P02458 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL2A1P02458 RNU6-1279P-201ENST00000383917 103 ntBASIC4.52□□□□□ -1.69
COL2A1P02458 RNVU1-14-201ENST00000384770 164 ntBASIC4.52□□□□□ -1.69
COL2A1P02458 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms