Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 VN1R25P-201ENST00000443385 738 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 EIF2S2P2-201ENST00000447161 982 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN9O95484 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
CLDN9O95484 VN1R40P-201ENST00000455196 941 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN9O95484 UQCRHP4-201ENST00000471686 272 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 AC091167.1-201ENST00000492017 396 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 RPS6P4-201ENST00000494693 758 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 AC023050.1-201ENST00000498198 304 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN9O95484 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.94□□□□□ -1.78
CLDN9O95484 MTND1P6-201ENST00000523621 946 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.94□□□□□ -1.78
CLDN9O95484 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN9O95484 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN9O95484 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN9O95484 AC106785.3-201ENST00000564064 847 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 AC025627.2-201ENST00000576220 160 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.94□□□□□ -1.78
CLDN9O95484 BNIP3P22-201ENST00000593399 556 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 VN1R84P-201ENST00000593697 235 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN9O95484 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.94□□□□□ -1.78
CLDN9O95484 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN9O95484 KATNBL1P1-201ENST00000605192 748 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.94□□□□□ -1.78
CLDN9O95484 AP000255.1-201ENST00000610276 676 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN9O95484 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLDN9O95484 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.94□□□□□ -1.78
CLDN9O95484 Z73965.1-201ENST00000623412 2297 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN9O95484 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN9O95484 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN9O95484 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN9O95484 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN9O95484 LARP1BP1-201ENST00000506036 1359 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CLDN9O95484 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN9O95484 SNORA62-201ENST00000365493 153 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 AC092647.1-201ENST00000420654 287 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.93□□□□□ -1.78
CLDN9O95484 CHIAP3-201ENST00000423668 1133 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 RPL23AP38-201ENST00000423801 469 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 MTND4LP14-201ENST00000429447 288 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 MTCYBP21-201ENST00000443300 1113 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN9O95484 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN9O95484 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN9O95484 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN9O95484 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN9O95484 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN9O95484 RPL38P1-201ENST00000460914 211 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 RPS26P15-201ENST00000488067 348 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 RN7SL604P-201ENST00000492589 296 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 HMGB3P14-201ENST00000494195 599 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 RPL31P61-201ENST00000496160 376 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 PRELID3BP7-201ENST00000503606 469 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 HPRT1P2-201ENST00000505250 544 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CLDN9O95484 AC106806.2-201ENST00000509365 500 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN9O95484 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN9O95484 AP002812.4-201ENST00000532139 286 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN9O95484 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.93□□□□□ -1.78
CLDN9O95484 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN9O95484 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN9O95484 OR4U1P-201ENST00000554958 912 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 GNRHR2P1-201ENST00000555315 631 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN9O95484 MIR4458-201ENST00000578872 75 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN9O95484 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN9O95484 CBX3P2-202ENST00000583365 535 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 KPNA2P3-201ENST00000584190 848 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 MIR5684-201ENST00000585074 65 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 AC020658.4-201ENST00000613987 684 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 MIR8059-201ENST00000620427 81 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 AC103858.2-201ENST00000621471 543 ntBASIC3.93□□□□□ -1.78
CLDN9O95484 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN9O95484 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CLDN9O95484 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN9O95484 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
CLDN9O95484 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN9O95484 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN9O95484 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN9O95484 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN9O95484 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN9O95484 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN9O95484 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN9O95484 MIR1251-201ENST00000408552 70 ntBASIC3.92□□□□□ -1.78
CLDN9O95484 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.92□□□□□ -1.78
CLDN9O95484 RPL30P3-201ENST00000424262 333 ntBASIC3.92□□□□□ -1.78
CLDN9O95484 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN9O95484 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN9O95484 XKRY2-201ENST00000442362 1093 ntBASIC3.92□□□□□ -1.78
CLDN9O95484 RPS4XP4-201ENST00000443195 763 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms