Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SHOX2O60902 NPM1P35-201ENST00000533043 868 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.94□□□□□ -1.78
SHOX2O60902 OR5AN2P-201ENST00000534535 896 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 AC008147.3-201ENST00000548666 354 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.94□□□□□ -1.78
SHOX2O60902 AC084783.1-201ENST00000565846 910 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.94□□□□□ -1.78
SHOX2O60902 MIR5047-201ENST00000579212 100 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 MIR5684-201ENST00000585074 65 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 AC008782.1-201ENST00000603386 430 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 AP005019.3-201ENST00000620418 560 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 Z73965.1-201ENST00000623412 2297 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHOX2O60902 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHOX2O60902 AP002088.1-201ENST00000382740 395 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.93□□□□□ -1.78
SHOX2O60902 AL450992.3-201ENST00000413192 568 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.93□□□□□ -1.78
SHOX2O60902 AC069213.2-201ENST00000420238 366 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 SEC63P1-201ENST00000425785 1258 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 RWDD4P2-201ENST00000426392 563 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.93□□□□□ -1.78
SHOX2O60902 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.93□□□□□ -1.78
SHOX2O60902 NDUFA5P1-201ENST00000433858 341 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.93□□□□□ -1.78
SHOX2O60902 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.93□□□□□ -1.78
SHOX2O60902 TXNP1-201ENST00000441872 371 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 PHBP16-201ENST00000446318 950 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 AL513533.1-201ENST00000453728 415 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 AC006539.3-201ENST00000454258 129 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.93□□□□□ -1.78
SHOX2O60902 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SHOX2O60902 AC010401.1-201ENST00000463867 348 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 RWDD4P1-201ENST00000488019 565 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.93□□□□□ -1.78
SHOX2O60902 DSTNP2-201ENST00000504533 515 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.93□□□□□ -1.78
SHOX2O60902 OR5AP1P-201ENST00000529730 940 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.93□□□□□ -1.78
SHOX2O60902 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.93□□□□□ -1.78
SHOX2O60902 HNRNPCP4-201ENST00000571636 900 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SHOX2O60902 AC115286.1-201ENST00000604298 434 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 AC010200.2-201ENST00000605098 235 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 AC017076.1-201ENST00000607613 578 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 AL450489.1-201ENST00000612071 468 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.93□□□□□ -1.78
SHOX2O60902 Z82217.1-201ENST00000625157 8149 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SHOX2O60902 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHOX2O60902 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SHOX2O60902 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.93□□□□□ -1.78
SHOX2O60902 AC116667.1-201ENST00000604855 2072 ntBASIC3.93□□□□□ -1.78
SHOX2O60902 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.93□□□□□ -1.78
SHOX2O60902 AC114546.3-201ENST00000623582 1734 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
SHOX2O60902 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.92□□□□□ -1.78
SHOX2O60902 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SHOX2O60902 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SHOX2O60902 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SHOX2O60902 AL359837.1-201ENST00000381357 287 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 RNU6-146P-201ENST00000384602 108 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 RNU6-225P-201ENST00000384613 103 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 AL034403.1-201ENST00000399414 885 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 HMGB3P19-201ENST00000403971 560 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SHOX2O60902 NRBF2P2-201ENST00000413087 861 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 AC119751.6-201ENST00000416712 186 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 AC019050.1-201ENST00000418508 492 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 AC008280.1-201ENST00000418851 412 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.92□□□□□ -1.78
SHOX2O60902 RPL12P34-201ENST00000424532 479 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 CNOT7P1-201ENST00000429006 852 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 AC092013.1-201ENST00000438795 332 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 AL162591.2-201ENST00000449634 317 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 NUTF2P7-201ENST00000453086 375 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.92□□□□□ -1.78
SHOX2O60902 OR52A4P-201ENST00000472867 958 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 AP000893.1-201ENST00000474462 794 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 S100A11P1-201ENST00000477525 312 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 AC084198.1-201ENST00000477747 402 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.92□□□□□ -1.78
SHOX2O60902 ACTG1P13-201ENST00000486987 1043 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 RPS3AP50-201ENST00000487064 803 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 AF213884.1-201ENST00000488102 463 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 RN7SL691P-201ENST00000494487 301 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.92□□□□□ -1.78
SHOX2O60902 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.92□□□□□ -1.78
SHOX2O60902 AC105233.3-201ENST00000531125 744 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SHOX2O60902 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.92□□□□□ -1.78
SHOX2O60902 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.92□□□□□ -1.78
SHOX2O60902 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SHOX2O60902 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SHOX2O60902 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.92□□□□□ -1.78
SHOX2O60902 AL590392.1-201ENST00000604960 446 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 AP005212.4-201ENST00000614206 710 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.92□□□□□ -1.78
SHOX2O60902 MIR7151-201ENST00000617477 60 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms