Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 RNA5SP443-201ENST00000363083 132 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 RPL21P75-201ENST00000396599 483 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 RPL21P28-201ENST00000401418 483 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AL592114.1-201ENST00000403842 483 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 GCNT1P4-201ENST00000404096 329 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 RN7SKP53-201ENST00000411337 315 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC004987.3-201ENST00000413879 771 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AL691447.1-201ENST00000419456 387 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 HSPE1P1-201ENST00000421494 318 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 HNRNPA3P4-201ENST00000427514 803 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 HIGD1AP4-201ENST00000430194 280 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AL358472.1-201ENST00000431295 329 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 RPS21P1-201ENST00000434479 247 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 RNF148-202ENST00000447240 839 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 RN7SL75P-201ENST00000461926 281 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 RPL21P39-201ENST00000463605 483 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 RPL21P104-201ENST00000464143 478 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC109327.1-201ENST00000471666 403 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 VN1R17P-201ENST00000472048 1090 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC011979.1-201ENST00000472300 483 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 RPL21P93-201ENST00000480465 489 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC233702.1-201ENST00000482905 502 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC087190.1-201ENST00000484462 480 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC093591.1-201ENST00000491435 481 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 RPL21P129-201ENST00000491732 478 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 RPL21P16-201ENST00000495531 483 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 MTND4LP2-201ENST00000502312 285 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 HSPD1P15-201ENST00000505573 1122 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 IGBP1P5-201ENST00000507524 1000 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 PTGES3P3-201ENST00000511479 482 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 TRMT10BP1-201ENST00000519377 943 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 OR4U1P-201ENST00000554958 912 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 RN7SL32P-201ENST00000580514 281 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AL109653.1-201ENST00000603091 248 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AL133338.2-201ENST00000604292 736 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AL354984.3-201ENST00000604803 325 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AP001437.1-201ENST00000608783 456 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AL359198.2-201ENST00000611836 194 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 5S_rRNA.28-201ENST00000638107 119 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC108206.1-201ENST00000570186 4159 ntBASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LINC01558Q9Y6Z2 AC004925.1-201ENST00000624256 2706 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AC103988.1-201ENST00000566382 2177 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 RNU6-356P-201ENST00000384140 107 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AL357075.1-201ENST00000404107 726 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 SNRPFP1-201ENST00000414761 252 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 RPL32P35-201ENST00000415214 394 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 CRYBB2P1-203ENST00000415709 538 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms