Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC012519.1-201ENST00000424588 610 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 USP9YP24-201ENST00000434374 697 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 USP9YP17-201ENST00000444617 696 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC092155.2-201ENST00000454675 477 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC096992.1-201ENST00000459808 709 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC109327.1-201ENST00000471666 403 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC091167.1-201ENST00000492017 396 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC010627.1-201ENST00000503819 1294 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC008958.1-201ENST00000511047 682 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC108120.2-201ENST00000512973 294 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 RNA5SP49-201ENST00000516450 115 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC109635.6-201ENST00000525487 1113 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 CYCSP29-201ENST00000533731 318 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AL049870.4-201ENST00000555741 486 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 SETP1-201ENST00000556014 845 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC023575.1-201ENST00000580510 358 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC069366.1-201ENST00000583159 838 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC025811.1-201ENST00000604312 472 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC096553.1-201ENST00000605169 829 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 PART1_2.1-201ENST00000612397 250 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AL355493.4-201ENST00000618530 292 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AP002791.1-201ENST00000623291 381 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC017104.5-201ENST00000637647 639 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AC008013.2-202ENST00000637965 364 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 ZNF849P-201ENST00000594711 1566 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 AL355578.1-201ENST00000607405 1328 ntBASIC4.64□□□□□ -1.67
SIX4Q9UIU6 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SIX4Q9UIU6 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 TAS2R15P-201ENST00000390674 928 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 OR6C69P-201ENST00000394268 893 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AL161909.1-201ENST00000397390 712 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 RN7SKP235-201ENST00000410662 305 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 RPL23AP26-201ENST00000412728 464 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 ACTR3P2-201ENST00000439585 1257 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 MTCYBP11-201ENST00000447254 1109 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 GTF2IP12-201ENST00000456547 356 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 RPL35P6-201ENST00000490024 372 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AC134050.1-201ENST00000495088 933 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 BOLA3P3-201ENST00000505182 232 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 RN7SKP122-201ENST00000515923 296 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AC023538.1-201ENST00000534576 736 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AC011611.5-201ENST00000552477 578 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 ELOCP35-201ENST00000604289 336 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AC018618.2-201ENST00000604770 446 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AC079610.2-201ENST00000604818 690 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AC011374.2-201ENST00000607135 526 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AC091979.2-201ENST00000607514 214 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AL445567.2-201ENST00000618935 498 ntBASIC4.63□□□□□ -1.67
SIX4Q9UIU6 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms