Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 RAD17P1-201ENST00000418130 2042 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AC108467.2-201ENST00000617640 1597 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 OR56B2P-202ENST00000641377 2453 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AC010132.2-201ENST00000295493 1043 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 Y_RNA.51-201ENST00000362725 102 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 GLULP6-201ENST00000399502 913 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 SETP15-201ENST00000412724 337 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 UBE2V1P3-201ENST00000439651 417 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AL138878.2-201ENST00000440581 1241 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 EEF1A1P39-201ENST00000440791 250 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 HSFY3P-201ENST00000444242 1191 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 HMGB3P6-201ENST00000444896 598 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AC012671.1-201ENST00000451912 203 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 DHFRP3-201ENST00000455595 559 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AC092754.2-201ENST00000463506 460 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 RPL23AP65-201ENST00000475608 468 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AC023161.2-201ENST00000551218 780 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AL391156.1-201ENST00000554965 554 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AC021483.2-201ENST00000567415 758 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 MIR4697-201ENST00000582977 78 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AL133370.2-201ENST00000619934 439 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AL359715.5-201ENST00000623431 443 ntBASIC5.47□□□□□ -1.53
SALL3Q9BXA9 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SALL3Q9BXA9 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 MTND4P34-201ENST00000572715 1371 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AC008033.1-201ENST00000216407 1162 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 RNU6-398P-201ENST00000384143 109 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 RNA5SP372-201ENST00000390836 115 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 RNU2-17P-201ENST00000410290 190 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 Y_RNA.619-201ENST00000410951 90 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AL356320.2-201ENST00000417263 507 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 ELOCP9-201ENST00000418624 239 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AC069213.2-201ENST00000420238 366 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AC114495.1-201ENST00000441274 436 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 UBE2D3P4-201ENST00000441973 436 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 RPS27AP15-201ENST00000447672 466 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 CCRL1P1-201ENST00000449542 1053 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 DDX39BP2-208ENST00000453923 258 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AC005410.1-202ENST00000460347 485 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 RPS29P22-201ENST00000472363 168 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 RPS4XP6-201ENST00000477670 797 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AC025674.1-201ENST00000507074 324 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AC021146.3-201ENST00000511911 260 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AC020937.1-201ENST00000519677 1013 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AC008966.2-201ENST00000606157 453 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AC245297.2-201ENST00000610119 565 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AC012409.3-201ENST00000611343 981 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 AL450489.1-201ENST00000612071 468 ntBASIC5.46□□□□□ -1.54
SALL3Q9BXA9 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.46□□□□□ -1.54
SALL3Q9BXA9 RMST_10.1-201ENST00000616309 154 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms