Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 A2MP1-204ENST00000566278 4130 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC135352.1-201ENST00000506173 1418 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AL356489.2-201ENST00000566968 3528 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 RNA5SP513-201ENST00000364648 118 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 BTBD10P2-201ENST00000404779 676 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 DPPA2P3-201ENST00000411853 655 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC093162.1-201ENST00000419682 124 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AL355433.1-201ENST00000422804 300 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 MTCYBP15-201ENST00000433123 1127 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC010881.1-201ENST00000433830 235 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 Z77249.1-201ENST00000444622 1175 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC108463.1-201ENST00000450258 347 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 BX276092.4-201ENST00000452056 248 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 RPS5P7-201ENST00000456664 608 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 HMGB1P38-201ENST00000490557 577 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC109462.1-201ENST00000491087 368 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 GAPDHP56-201ENST00000506031 988 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC110775.1-201ENST00000513721 462 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 IGLV3-26-201ENST00000520756 302 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 OR8K4P-201ENST00000534608 872 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AL035461.2-201ENST00000619201 524 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 MIR7154-201ENST00000620673 73 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC112694.2-201ENST00000623697 768 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 MIR4302-201ENST00000638058 60 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 AC006971.1-201ENST00000407916 4486 ntBASIC4.39□□□□□ -1.71
VPS33AQ96AX1 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS33AQ96AX1 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 NMD3P1-201ENST00000439704 1488 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 U3.15-201ENST00000365398 212 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 MIR765-201ENST00000390226 114 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 ENSAP1-201ENST00000392855 326 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AL645733.1-201ENST00000402250 217 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AC004552.1-201ENST00000419089 348 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AC233981.1-201ENST00000423224 461 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 RPL23AP25-201ENST00000430973 463 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 H2AFZP5-201ENST00000446960 382 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 PPIAP3-201ENST00000450588 505 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 CEACAMP6-201ENST00000452007 574 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 HMGN3P1-201ENST00000453847 193 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AC146507.1-201ENST00000468335 354 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 RPS26P3-201ENST00000470205 348 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AC090543.2-201ENST00000483963 348 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AC090013.1-201ENST00000485147 480 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AC004057.1-201ENST00000485827 348 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms