Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 BMS1P22-201ENST00000414726 313 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 RPL7L1P9-201ENST00000431298 745 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC006994.1-201ENST00000438212 839 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 RPL12P49-201ENST00000441100 121 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 PHBP16-201ENST00000446318 950 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 RAB28P3-201ENST00000448325 597 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 RPL29P29-201ENST00000448725 423 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 KF459542.1-201ENST00000450908 553 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 MRPS31P2-201ENST00000451581 518 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 YWHAEP1-201ENST00000453697 763 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AURKAPS2-201ENST00000454983 333 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC021205.1-201ENST00000468797 348 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 RPS29P19-201ENST00000479709 171 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AL139099.1-201ENST00000497398 403 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 MGST2-204ENST00000506797 634 ntTSL 2 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC108064.1-201ENST00000513791 460 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC068657.1-201ENST00000520807 306 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 OR4A46P-201ENST00000527255 933 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC006512.2-201ENST00000543250 486 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC011602.1-201ENST00000546484 331 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 SETP2-201ENST00000553886 926 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AL109766.1-201ENST00000555080 552 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AL138895.2-201ENST00000603019 178 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC113194.1-201ENST00000606037 500 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AL390240.1-201ENST00000612950 384 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 MIR6883-201ENST00000614952 78 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 MIR6732-201ENST00000619365 60 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 AC026951.1-201ENST00000559530 2459 ntBASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SPTSSBQ8NFR3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 RNU6-600P-201ENST00000362524 99 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 RNU6-697P-201ENST00000363348 107 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 U8.9-201ENST00000365667 134 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AL031121.1-201ENST00000406553 254 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 RNA5SP107-201ENST00000411358 122 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 FAR2P2-201ENST00000413041 594 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 RPS7P13-201ENST00000413955 498 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 HMGB3P23-201ENST00000414981 585 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AL590806.1-201ENST00000415818 853 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 MRPL50P2-201ENST00000416821 482 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 MTCYBP7-201ENST00000419540 1134 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 SLC9B1P4-201ENST00000421957 1288 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC008065.1-201ENST00000428525 348 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 VDAC1P6-201ENST00000430062 855 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AL354893.1-201ENST00000433735 348 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 RPL21P112-201ENST00000434403 463 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC097523.2-201ENST00000435551 652 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 RPL23AP93-201ENST00000440847 484 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC064862.4-201ENST00000442180 334 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 EEF1B2P3-201ENST00000447718 678 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AL162591.2-201ENST00000449634 317 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC092647.2-201ENST00000452998 253 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 RPL7P22-201ENST00000466005 733 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 RPL23AP12-201ENST00000467573 473 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC093663.1-201ENST00000497190 394 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 RPL23AP55-201ENST00000498163 452 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 SCARNA22-201ENST00000503991 125 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms