Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
VPS8Q8N3P4 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS8Q8N3P4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS8Q8N3P4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS8Q8N3P4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS8Q8N3P4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
VPS8Q8N3P4 RN7SKP177-201ENST00000410567 355 ntBASIC5.63□□□□□ -1.51
VPS8Q8N3P4 AL050321.1-201ENST00000432363 400 ntBASIC5.63□□□□□ -1.51
VPS8Q8N3P4 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS8Q8N3P4 PDSS1P2-201ENST00000449397 678 ntBASIC5.63□□□□□ -1.51
VPS8Q8N3P4 PRSS3P4-201ENST00000453323 162 ntBASIC5.63□□□□□ -1.51
VPS8Q8N3P4 RN7SL93P-201ENST00000463035 293 ntBASIC5.63□□□□□ -1.51
VPS8Q8N3P4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS8Q8N3P4 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS8Q8N3P4 AC012123.2-201ENST00000485809 248 ntBASIC5.63□□□□□ -1.51
VPS8Q8N3P4 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.63□□□□□ -1.51
VPS8Q8N3P4 AC103843.2-201ENST00000530523 682 ntBASIC5.63□□□□□ -1.51
VPS8Q8N3P4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS8Q8N3P4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS8Q8N3P4 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS8Q8N3P4 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.63□□□□□ -1.51
VPS8Q8N3P4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS8Q8N3P4 AC115621.1-201ENST00000604653 858 ntBASIC5.63□□□□□ -1.51
VPS8Q8N3P4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC5.63□□□□□ -1.51
VPS8Q8N3P4 AL392088.2-201ENST00000637607 285 ntBASIC5.63□□□□□ -1.51
VPS8Q8N3P4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VPS8Q8N3P4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
VPS8Q8N3P4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS8Q8N3P4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS8Q8N3P4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS8Q8N3P4 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
VPS8Q8N3P4 AC007656.2-201ENST00000624902 4547 ntBASIC5.62□□□□□ -1.51
VPS8Q8N3P4 AC027290.2-201ENST00000623210 18662 ntBASIC5.62□□□□□ -1.51
VPS8Q8N3P4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
VPS8Q8N3P4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
VPS8Q8N3P4 MIR490-201ENST00000384865 128 ntBASIC5.62□□□□□ -1.51
VPS8Q8N3P4 YME1L1P1-201ENST00000429435 297 ntBASIC5.62□□□□□ -1.51
VPS8Q8N3P4 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS8Q8N3P4 ARL4AP4-201ENST00000434170 518 ntBASIC5.62□□□□□ -1.51
VPS8Q8N3P4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS8Q8N3P4 AC084357.1-201ENST00000473404 255 ntBASIC5.62□□□□□ -1.51
VPS8Q8N3P4 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
VPS8Q8N3P4 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS8Q8N3P4 OR5B10P-201ENST00000532869 642 ntBASIC5.62□□□□□ -1.51
VPS8Q8N3P4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
VPS8Q8N3P4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS8Q8N3P4 AL391261.4-201ENST00000616012 481 ntBASIC5.62□□□□□ -1.51
VPS8Q8N3P4 AC016957.2-201ENST00000616998 848 ntBASIC5.62□□□□□ -1.51
VPS8Q8N3P4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS8Q8N3P4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS8Q8N3P4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
VPS8Q8N3P4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS8Q8N3P4 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS8Q8N3P4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
VPS8Q8N3P4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS8Q8N3P4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC5.61□□□□□ -1.51
VPS8Q8N3P4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS8Q8N3P4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS8Q8N3P4 AC114814.2-201ENST00000419195 485 ntBASIC5.61□□□□□ -1.51
VPS8Q8N3P4 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS8Q8N3P4 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS8Q8N3P4 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
VPS8Q8N3P4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS8Q8N3P4 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS8Q8N3P4 OR6C71P-202ENST00000641886 1107 ntBASIC5.61□□□□□ -1.51
VPS8Q8N3P4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
VPS8Q8N3P4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS8Q8N3P4 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS8Q8N3P4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS8Q8N3P4 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS8Q8N3P4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS8Q8N3P4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VPS8Q8N3P4 AC007685.1-201ENST00000329806 452 ntBASIC5.6□□□□□ -1.51
VPS8Q8N3P4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
VPS8Q8N3P4 RNU1-89P-201ENST00000384592 164 ntBASIC5.6□□□□□ -1.51
VPS8Q8N3P4 MIR200C-201ENST00000384980 68 ntBASIC5.6□□□□□ -1.51
VPS8Q8N3P4 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS8Q8N3P4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS8Q8N3P4 RN7SL594P-201ENST00000470590 287 ntBASIC5.6□□□□□ -1.51
VPS8Q8N3P4 SETP14-201ENST00000497538 873 ntBASIC5.6□□□□□ -1.51
VPS8Q8N3P4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS8Q8N3P4 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS8Q8N3P4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
VPS8Q8N3P4 AC006272.2-201ENST00000594725 163 ntBASIC5.6□□□□□ -1.51
VPS8Q8N3P4 AC012314.7-201ENST00000619693 93 ntBASIC5.6□□□□□ -1.51
VPS8Q8N3P4 AP003355.3-201ENST00000623465 114 ntBASIC5.6□□□□□ -1.51
VPS8Q8N3P4 AL732372.2-225ENST00000642124 456 ntBASIC5.6□□□□□ -1.51
VPS8Q8N3P4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS8Q8N3P4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS8Q8N3P4 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS8Q8N3P4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS8Q8N3P4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS8Q8N3P4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS8Q8N3P4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS8Q8N3P4 RNU1-33P-201ENST00000364249 162 ntBASIC5.59□□□□□ -1.51
VPS8Q8N3P4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS8Q8N3P4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS8Q8N3P4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS8Q8N3P4 RPS4XP2-201ENST00000458402 793 ntBASIC5.59□□□□□ -1.51
VPS8Q8N3P4 FTH1P24-201ENST00000503502 462 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms