Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 MTCO1P40-201ENST00000574371 625 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 MIR5708-201ENST00000579723 85 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC125494.3-201ENST00000602759 455 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 MRPS35P3-201ENST00000603189 709 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC020910.3-201ENST00000603701 874 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AP001521.2-201ENST00000608772 546 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC007497.1-201ENST00000610421 561 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC015813.4-201ENST00000610469 179 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 EIF3FP1-201ENST00000613970 806 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC234782.5-201ENST00000617723 324 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC024595.1-201ENST00000623088 387 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC021755.1-201ENST00000559747 1447 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 SMG1P6-201ENST00000532337 2930 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 DHX9P1-201ENST00000436565 3076 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AL445523.1-201ENST00000451184 1362 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AL359922.3-201ENST00000624779 1670 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 RN7SKP95-201ENST00000362860 303 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 SNORD116-9-201ENST00000384000 95 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 SNORD116-3-201ENST00000384287 95 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 SNORD116-7-201ENST00000384404 95 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 SNORD116-5-201ENST00000384462 95 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 RNA5SP372-201ENST00000390836 115 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AL445487.1-201ENST00000415694 1580 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 HSFY4P-201ENST00000415994 1181 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC027644.1-201ENST00000419595 298 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 RPL7P53-201ENST00000421245 739 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 EIF4EP1-201ENST00000422311 642 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AL365203.2-201ENST00000423444 196 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 RPS12P5-201ENST00000423449 371 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 MTND4P20-201ENST00000424125 869 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC234781.2-201ENST00000426370 994 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 FTH1P16-201ENST00000435241 552 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC069285.2-201ENST00000440210 275 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC073850.1-201ENST00000449243 255 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 ANKRD26P4-201ENST00000455755 950 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC110749.1-201ENST00000462007 357 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC006499.3-201ENST00000506077 748 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC093311.1-201ENST00000506586 2021 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 OR10G5P-201ENST00000532733 358 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 RPL21P7-201ENST00000557463 483 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 RN7SL753P-201ENST00000581238 290 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 NBR2-204ENST00000587322 63 ntBASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLIP4Q8N3C7 AL121612.2-201ENST00000612261 482 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms