Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ATP5LP3-201ENST00000514223 304 ntBASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 BX510359.5-201ENST00000515651 304 ntBASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 HSPE1P2-201ENST00000554777 306 ntBASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 AC141257.3-201ENST00000572906 215 ntBASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 AP000473.2-201ENST00000602659 1537 ntBASIC5.48□□□□□ -1.53
TRIM48Q8IWZ4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 MUC2-202ENST00000613187 4845 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AL355488.2-201ENST00000609909 2850 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AL034370.1-201ENST00000397254 1590 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AL022311.1-201ENST00000623726 19416 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 GAPDHP24-201ENST00000328713 983 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 Y_RNA.70-201ENST00000362886 110 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 Y_RNA.97-201ENST00000363094 102 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 RN7SKP160-201ENST00000363804 340 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 RNA5SP132-201ENST00000364725 118 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 SNORA51.12-201ENST00000384448 134 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 MIR551A-201ENST00000385042 96 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 RPS24P12-201ENST00000402084 394 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 Z93019.1-201ENST00000416450 973 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC009480.2-201ENST00000422916 432 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 RPL7P56-201ENST00000429441 717 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 USP24P1-201ENST00000433802 779 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AL031663.1-201ENST00000437445 219 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AL390119.1-201ENST00000440329 312 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 OR7E125P-201ENST00000443450 846 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 NFU1P2-201ENST00000448700 469 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 VDAC2P4-201ENST00000452925 711 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC100832.1-201ENST00000471945 383 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 RPL7P24-201ENST00000493052 752 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 ST13P12-201ENST00000508958 1094 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 PAICSP4-201ENST00000517543 1253 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC027309.2-201ENST00000520566 192 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 NMNAT1P1-201ENST00000554095 876 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC091304.9-201ENST00000612091 226 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC022467.1-201ENST00000614738 749 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC008250.2-201ENST00000615261 205 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC026634.1-201ENST00000634369 198 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC093591.3-201ENST00000634516 308 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 AC099654.14-201ENST00000638599 341 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 FAM157B-203ENST00000639350 358 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TRIM48Q8IWZ4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.46□□□□□ -1.53
TRIM48Q8IWZ4 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM48Q8IWZ4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM48Q8IWZ4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM48Q8IWZ4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM48Q8IWZ4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms