Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL110118.1-201ENST00000553543 400 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 MIR4737-201ENST00000583979 81 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 VN1R90P-201ENST00000595717 726 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AL512782.1-201ENST00000603093 364 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 OR2BH1P-201ENST00000608850 864 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AC006338.2-201ENST00000616864 791 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 MIR6853-201ENST00000619642 74 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 Z69908.1-201ENST00000622603 247 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 RPL23AP61-201ENST00000623642 466 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 OR1S1-201ENST00000624470 978 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AC096656.1-201ENST00000623826 1364 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AL390237.1-201ENST00000404226 1415 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AC133552.1-201ENST00000569988 4007 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AC131971.1-201ENST00000332881 1482 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 RNA5SP151-201ENST00000365632 117 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 MIR921-201ENST00000401133 56 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AL645733.1-201ENST00000402250 217 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 RNU2-22P-201ENST00000411266 212 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 MTCO1P21-201ENST00000416634 589 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AC104837.2-201ENST00000427236 424 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AC008072.1-201ENST00000434254 824 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 VN1R54P-201ENST00000435210 1049 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 NPM1P33-201ENST00000438918 872 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AL360221.1-201ENST00000445989 335 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AL157827.1-201ENST00000447622 132 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AC006042.3-201ENST00000454684 1469 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AC107398.1-201ENST00000486904 505 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 MTND5P13-201ENST00000513046 1079 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 OR7H2P-201ENST00000513483 306 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 FABP5P12-201ENST00000515543 389 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 RPL12P22-201ENST00000519073 490 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AC134698.4-201ENST00000523451 826 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 EDDM3DP-201ENST00000554692 434 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AC007342.5-201ENST00000571340 2142 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AC233702.9-201ENST00000581528 203 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AC010928.1-201ENST00000592477 1447 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AC013468.1-201ENST00000608680 598 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AL159169.2-201ENST00000610061 1269 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AC245297.2-201ENST00000610119 565 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AL133243.1-201ENST00000614487 366 ntBASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF549Q6P9A3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.68
ZNF549Q6P9A3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
ZNF549Q6P9A3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
ZNF549Q6P9A3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms