Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC005858.4-201ENST00000623191 700 ntBASIC6.22□□□□□ -1.41
RNF43Q68DV7 AC024023.1-201ENST00000624530 922 ntBASIC6.22□□□□□ -1.41
RNF43Q68DV7 TTK-211ENST00000627129 240 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF43Q68DV7 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF43Q68DV7 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RNF43Q68DV7 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.22□□□□□ -1.41
RNF43Q68DV7 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF43Q68DV7 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF43Q68DV7 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
RNF43Q68DV7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.22□□□□□ -1.41
RNF43Q68DV7 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
RNF43Q68DV7 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RNF43Q68DV7 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
RNF43Q68DV7 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
RNF43Q68DV7 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RNF43Q68DV7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.21□□□□□ -1.41
RNF43Q68DV7 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
RNF43Q68DV7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF43Q68DV7 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF43Q68DV7 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF43Q68DV7 TMSB4XP2-201ENST00000335179 210 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 Y_RNA.166-201ENST00000363730 102 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 RNU6-723P-201ENST00000383973 107 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 Y_RNA.422-201ENST00000384054 114 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 Y_RNA.459-201ENST00000384251 102 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 AL049693.1-201ENST00000402760 611 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 HMGB1P11-201ENST00000413899 637 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 AL354766.1-201ENST00000423396 542 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 AL731534.1-201ENST00000434711 269 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC073410.1-201ENST00000435125 589 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 RPS3AP38-201ENST00000435889 763 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 PGBD4P3-201ENST00000440731 581 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC016027.4-201ENST00000450866 277 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 AL445665.1-202ENST00000452436 324 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 THAP6-203ENST00000502620 582 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 RPL7L1P13-201ENST00000511702 739 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC010493.1-201ENST00000513479 292 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC093677.1-201ENST00000514414 678 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 RNA5SP362-201ENST00000516048 118 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 AP006245.2-201ENST00000522004 300 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC083923.1-201ENST00000523708 376 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 H3F3BP2-201ENST00000583907 357 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC009977.1-201ENST00000586015 570 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC112191.3-201ENST00000604371 277 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC021106.3-201ENST00000623925 531 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC134503.1-201ENST00000633048 54 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 AC138907.8-201ENST00000623981 2256 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 ZNF733P-202ENST00000444809 1573 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 AF287957.1-201ENST00000607368 1595 ntBASIC6.21□□□□□ -1.42
RNF43Q68DV7 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF43Q68DV7 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RNF43Q68DV7 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RNF43Q68DV7 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF43Q68DV7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF43Q68DV7 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RNF43Q68DV7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.2□□□□□ -1.42
RNF43Q68DV7 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF43Q68DV7 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF43Q68DV7 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF43Q68DV7 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF43Q68DV7 CYP1D1P-201ENST00000416662 1433 ntBASIC6.2□□□□□ -1.42
RNF43Q68DV7 MIR133A2-201ENST00000347538 102 ntBASIC6.2□□□□□ -1.42
RNF43Q68DV7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF43Q68DV7 Y_RNA.97-201ENST00000363094 102 ntBASIC6.2□□□□□ -1.42
RNF43Q68DV7 Y_RNA.145-201ENST00000363527 102 ntBASIC6.2□□□□□ -1.42
RNF43Q68DV7 RNU6-1103P-201ENST00000384150 107 ntBASIC6.2□□□□□ -1.42
RNF43Q68DV7 NACAP7-201ENST00000407371 609 ntBASIC6.2□□□□□ -1.42
RNF43Q68DV7 MIR548P-201ENST00000408336 84 ntBASIC6.2□□□□□ -1.42
RNF43Q68DV7 RNU6-908P-201ENST00000410160 94 ntBASIC6.2□□□□□ -1.42
RNF43Q68DV7 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.2□□□□□ -1.42
RNF43Q68DV7 AL592293.2-201ENST00000422292 996 ntBASIC6.2□□□□□ -1.42
RNF43Q68DV7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF43Q68DV7 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF43Q68DV7 BX276092.6-201ENST00000430476 250 ntBASIC6.2□□□□□ -1.42
RNF43Q68DV7 AL365400.1-201ENST00000431854 640 ntBASIC6.2□□□□□ -1.42
RNF43Q68DV7 AC024082.2-201ENST00000434771 238 ntBASIC6.2□□□□□ -1.42
RNF43Q68DV7 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.2□□□□□ -1.42
RNF43Q68DV7 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms