Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
FOXF1Q12946 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.43□□□□□ -1.86
FOXF1Q12946 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.43□□□□□ -1.86
FOXF1Q12946 AC074029.4-201ENST00000624796 1859 ntBASIC3.43□□□□□ -1.86
FOXF1Q12946 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.43□□□□□ -1.86
FOXF1Q12946 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
FOXF1Q12946 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
FOXF1Q12946 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
FOXF1Q12946 ASNSP1-201ENST00000518311 1939 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.42□□□□□ -1.86
FOXF1Q12946 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
FOXF1Q12946 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
FOXF1Q12946 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
FOXF1Q12946 MTND4P10-201ENST00000446199 1363 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.42□□□□□ -1.86
FOXF1Q12946 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
FOXF1Q12946 MIR423-201ENST00000362201 94 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
FOXF1Q12946 RNU6-1320P-201ENST00000390838 107 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 RNU6-1269P-201ENST00000391139 107 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
FOXF1Q12946 OR5AW1P-201ENST00000426334 1006 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 AL591419.1-201ENST00000427423 339 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 USP12PY-201ENST00000427677 1064 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 OR4F13P-201ENST00000428478 931 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 SETD6P1-201ENST00000444575 317 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.42□□□□□ -1.86
FOXF1Q12946 AC098824.1-201ENST00000453565 980 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.42□□□□□ -1.86
FOXF1Q12946 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.42□□□□□ -1.86
FOXF1Q12946 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.42□□□□□ -1.86
FOXF1Q12946 RNU6-599P-201ENST00000459383 107 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 RNU6-1193P-201ENST00000459461 107 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.42□□□□□ -1.86
FOXF1Q12946 AC108941.1-201ENST00000502853 530 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 AC004069.2-201ENST00000505438 1114 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.42□□□□□ -1.86
FOXF1Q12946 RN7SKP141-201ENST00000516167 338 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.42□□□□□ -1.86
FOXF1Q12946 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.42□□□□□ -1.86
FOXF1Q12946 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.42□□□□□ -1.86
FOXF1Q12946 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
FOXF1Q12946 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.42□□□□□ -1.86
FOXF1Q12946 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.42□□□□□ -1.86
FOXF1Q12946 AC106785.1-201ENST00000565935 262 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 AC107982.3-201ENST00000584957 985 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.42□□□□□ -1.86
FOXF1Q12946 EIF1P6-201ENST00000600054 334 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 AL390816.3-201ENST00000604527 1066 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
FOXF1Q12946 SNORA62.6-201ENST00000606322 83 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 AC012557.1-201ENST00000607115 611 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.42□□□□□ -1.86
FOXF1Q12946 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
FOXF1Q12946 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
FOXF1Q12946 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
FOXF1Q12946 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
FOXF1Q12946 RNU6-368P-201ENST00000620928 107 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 RNU6-538P-201ENST00000622329 107 ntBASIC3.42□□□□□ -1.86
FOXF1Q12946 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
FOXF1Q12946 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
FOXF1Q12946 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
FOXF1Q12946 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
FOXF1Q12946 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
FOXF1Q12946 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.42□□□□□ -1.86
FOXF1Q12946 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
FOXF1Q12946 AC006042.3-201ENST00000454684 1469 ntBASIC3.41□□□□□ -1.86
FOXF1Q12946 AC024560.2-201ENST00000507981 1497 ntBASIC3.41□□□□□ -1.86
FOXF1Q12946 AC008725.1-201ENST00000605123 2263 ntBASIC3.41□□□□□ -1.86
FOXF1Q12946 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.41□□□□□ -1.86
FOXF1Q12946 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
FOXF1Q12946 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
FOXF1Q12946 SOD2P1-201ENST00000396543 562 ntBASIC3.41□□□□□ -1.86
FOXF1Q12946 AL589994.1-201ENST00000404962 340 ntBASIC3.41□□□□□ -1.86
FOXF1Q12946 AL356967.1-201ENST00000406305 431 ntBASIC3.41□□□□□ -1.86
FOXF1Q12946 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
FOXF1Q12946 AL390879.2-203ENST00000426943 1121 ntBASIC3.41□□□□□ -1.86
FOXF1Q12946 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.41□□□□□ -1.86
FOXF1Q12946 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.41□□□□□ -1.86
FOXF1Q12946 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.41□□□□□ -1.86
FOXF1Q12946 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.41□□□□□ -1.86
FOXF1Q12946 AC091959.2-201ENST00000477363 321 ntBASIC3.41□□□□□ -1.86
FOXF1Q12946 AC016687.1-201ENST00000482574 353 ntBASIC3.41□□□□□ -1.86
FOXF1Q12946 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
FOXF1Q12946 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.41□□□□□ -1.86
FOXF1Q12946 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.41□□□□□ -1.86
FOXF1Q12946 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.41□□□□□ -1.86
FOXF1Q12946 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
FOXF1Q12946 AP005901.4-201ENST00000577336 569 ntBASIC3.41□□□□□ -1.86
FOXF1Q12946 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.41□□□□□ -1.86
FOXF1Q12946 AL451086.1-201ENST00000605596 223 ntBASIC3.41□□□□□ -1.86
FOXF1Q12946 BRDTP1-201ENST00000605735 677 ntBASIC3.41□□□□□ -1.86
FOXF1Q12946 AC015908.5-201ENST00000623289 343 ntBASIC3.41□□□□□ -1.86
FOXF1Q12946 AC020978.9-201ENST00000624380 1141 ntBASIC3.41□□□□□ -1.86
FOXF1Q12946 AC090971.4-201ENST00000560291 1800 ntBASIC3.41□□□□□ -1.86
FOXF1Q12946 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
FOXF1Q12946 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
FOXF1Q12946 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
FOXF1Q12946 OR11H5P-202ENST00000641612 1325 ntBASIC3.41□□□□□ -1.86
FOXF1Q12946 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms