Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC009313.2-201ENST00000417893 1941 ntBASIC2.59□□□□□ -2
PRKDCP78527 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
PRKDCP78527 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC2.59□□□□□ -2
PRKDCP78527 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
PRKDCP78527 RNA5SP197-201ENST00000363357 119 ntBASIC2.59□□□□□ -2
PRKDCP78527 NPM1P25-201ENST00000429734 854 ntBASIC2.59□□□□□ -2
PRKDCP78527 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC2.59□□□□□ -2
PRKDCP78527 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC2.59□□□□□ -2
PRKDCP78527 MORF4L2P1-201ENST00000503761 858 ntBASIC2.59□□□□□ -2
PRKDCP78527 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC2.59□□□□□ -2
PRKDCP78527 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.59□□□□□ -2
PRKDCP78527 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -2
PRKDCP78527 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
PRKDCP78527 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
PRKDCP78527 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
PRKDCP78527 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
PRKDCP78527 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
PRKDCP78527 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PRKDCP78527 AC010401.2-201ENST00000575137 4934 ntBASIC2.58□□□□□ -2
PRKDCP78527 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC2.58□□□□□ -2
PRKDCP78527 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.58□□□□□ -2
PRKDCP78527 AL031679.1-201ENST00000400616 525 ntBASIC2.58□□□□□ -2
PRKDCP78527 AL080315.1-201ENST00000406055 466 ntBASIC2.58□□□□□ -2
PRKDCP78527 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.58□□□□□ -2
PRKDCP78527 RPL7P36-201ENST00000444633 681 ntBASIC2.58□□□□□ -2
PRKDCP78527 PSMC1P13-201ENST00000458195 985 ntBASIC2.58□□□□□ -2
PRKDCP78527 AC108941.1-201ENST00000502853 530 ntBASIC2.58□□□□□ -2
PRKDCP78527 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
PRKDCP78527 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC2.58□□□□□ -2
PRKDCP78527 AL359693.1-201ENST00000614959 2407 ntBASIC2.58□□□□□ -2
PRKDCP78527 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
PRKDCP78527 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC2.58□□□□□ -2
PRKDCP78527 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC2.58□□□□□ -2
PRKDCP78527 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.58□□□□□ -2
PRKDCP78527 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC2.58□□□□□ -2
PRKDCP78527 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC2.58□□□□□ -2
PRKDCP78527 RPS23P10-201ENST00000416185 486 ntBASIC2.58□□□□□ -2
PRKDCP78527 Z93242.1-201ENST00000427102 353 ntBASIC2.58□□□□□ -2
PRKDCP78527 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.58□□□□□ -2
PRKDCP78527 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.58□□□□□ -2
PRKDCP78527 AC092868.3-201ENST00000560515 784 ntBASIC2.58□□□□□ -2
PRKDCP78527 AC090312.2-201ENST00000582687 378 ntBASIC2.58□□□□□ -2
PRKDCP78527 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.58□□□□□ -2
PRKDCP78527 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC2.58□□□□□ -2
PRKDCP78527 AC010503.3-201ENST00000594355 540 ntBASIC2.58□□□□□ -2
PRKDCP78527 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.58□□□□□ -2
PRKDCP78527 HSPD1P14-201ENST00000432666 1618 ntBASIC2.58□□□□□ -2
PRKDCP78527 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC2.58□□□□□ -2
PRKDCP78527 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.58□□□□□ -2
PRKDCP78527 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC2.58□□□□□ -2
PRKDCP78527 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PRKDCP78527 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.58□□□□□ -2
PRKDCP78527 AL139413.1-201ENST00000421309 217 ntBASIC2.58□□□□□ -2
PRKDCP78527 AL353705.1-201ENST00000433468 480 ntBASIC2.58□□□□□ -2
PRKDCP78527 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC2.58□□□□□ -2
PRKDCP78527 AL135938.1-201ENST00000443141 297 ntBASIC2.58□□□□□ -2
PRKDCP78527 AL513124.1-201ENST00000450410 614 ntBASIC2.58□□□□□ -2
PRKDCP78527 AC067852.4-201ENST00000590314 478 ntBASIC2.58□□□□□ -2
PRKDCP78527 RPL23AP92-201ENST00000603609 255 ntBASIC2.58□□□□□ -2
PRKDCP78527 SNORA62.6-201ENST00000606322 83 ntBASIC2.58□□□□□ -2
PRKDCP78527 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC2.58□□□□□ -2
PRKDCP78527 AL365361.1-201ENST00000566942 3481 ntBASIC2.58□□□□□ -2
PRKDCP78527 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PRKDCP78527 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PRKDCP78527 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
PRKDCP78527 AL358178.1-201ENST00000407698 397 ntBASIC2.57□□□□□ -2
PRKDCP78527 AC010740.1-201ENST00000417035 684 ntBASIC2.57□□□□□ -2
PRKDCP78527 NPM1P11-201ENST00000417106 855 ntBASIC2.57□□□□□ -2
PRKDCP78527 HMGB1P5-202ENST00000451497 985 ntBASIC2.57□□□□□ -2
PRKDCP78527 AL591473.1-201ENST00000464297 313 ntBASIC2.57□□□□□ -2
PRKDCP78527 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.57□□□□□ -2
PRKDCP78527 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC2.57□□□□□ -2
PRKDCP78527 DPPA3P2-201ENST00000553589 478 ntBASIC2.57□□□□□ -2
PRKDCP78527 AP000553.6-201ENST00000641242 118 ntBASIC2.57□□□□□ -2
PRKDCP78527 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
PRKDCP78527 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC2.57□□□□□ -2
PRKDCP78527 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC2.57□□□□□ -2
PRKDCP78527 AL138885.1-201ENST00000405921 675 ntBASIC2.57□□□□□ -2
PRKDCP78527 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.57□□□□□ -2
PRKDCP78527 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.57□□□□□ -2
PRKDCP78527 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
PRKDCP78527 MIR7843-201ENST00000622274 79 ntBASIC2.57□□□□□ -2
PRKDCP78527 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC2.57□□□□□ -2
PRKDCP78527 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.57□□□□□ -2
PRKDCP78527 SMG1P4-204ENST00000523028 4131 ntBASIC2.57□□□□□ -2
PRKDCP78527 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC2.57□□□□□ -2
PRKDCP78527 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
PRKDCP78527 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
PRKDCP78527 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC2.57□□□□□ -2
PRKDCP78527 ATP5F1P6-201ENST00000402768 767 ntBASIC2.57□□□□□ -2
PRKDCP78527 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.57□□□□□ -2
PRKDCP78527 BX842559.1-201ENST00000419615 532 ntBASIC2.57□□□□□ -2
PRKDCP78527 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.57□□□□□ -2
PRKDCP78527 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.57□□□□□ -2
PRKDCP78527 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.57□□□□□ -2
PRKDCP78527 RN7SKP132-201ENST00000516001 208 ntBASIC2.57□□□□□ -2
PRKDCP78527 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.57□□□□□ -2
PRKDCP78527 AC095038.2-201ENST00000621464 1070 ntBASIC2.57□□□□□ -2
PRKDCP78527 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.57□□□□□ -2
PRKDCP78527 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms