Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.58□□□□□ -1.68
VCPP55072 AC022884.3-201ENST00000579571 248 ntBASIC4.58□□□□□ -1.68
VCPP55072 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.58□□□□□ -1.68
VCPP55072 AC007390.2-201ENST00000606229 3803 ntBASIC4.58□□□□□ -1.68
VCPP55072 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.58□□□□□ -1.68
VCPP55072 uc_338.9-201ENST00000617424 182 ntBASIC4.58□□□□□ -1.68
VCPP55072 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VCPP55072 MIR6891-201ENST00000618788 93 ntBASIC4.58□□□□□ -1.68
VCPP55072 AC119674.1-212ENST00000641155 993 ntBASIC4.58□□□□□ -1.68
VCPP55072 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.58□□□□□ -1.68
VCPP55072 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
VCPP55072 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VCPP55072 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
VCPP55072 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VCPP55072 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.57□□□□□ -1.68
VCPP55072 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VCPP55072 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VCPP55072 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
VCPP55072 AL589826.1-201ENST00000340697 249 ntBASIC4.57□□□□□ -1.68
VCPP55072 RNU1-15P-201ENST00000353977 144 ntBASIC4.57□□□□□ -1.68
VCPP55072 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VCPP55072 MIR7-3-201ENST00000384898 110 ntBASIC4.57□□□□□ -1.68
VCPP55072 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.57□□□□□ -1.68
VCPP55072 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.57□□□□□ -1.68
VCPP55072 RNF19BPX-201ENST00000426224 625 ntBASIC4.57□□□□□ -1.68
VCPP55072 AC073069.1-201ENST00000428657 441 ntBASIC4.57□□□□□ -1.68
VCPP55072 AL050321.1-201ENST00000432363 400 ntBASIC4.57□□□□□ -1.68
VCPP55072 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.57□□□□□ -1.68
VCPP55072 RPL23AP52-201ENST00000439311 478 ntBASIC4.57□□□□□ -1.68
VCPP55072 UBE2V1P3-201ENST00000439651 417 ntBASIC4.57□□□□□ -1.68
VCPP55072 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VCPP55072 VN1R48P-201ENST00000448149 1036 ntBASIC4.57□□□□□ -1.68
VCPP55072 AC239809.1-201ENST00000450470 217 ntBASIC4.57□□□□□ -1.68
VCPP55072 RPL5P32-201ENST00000454085 879 ntBASIC4.57□□□□□ -1.68
VCPP55072 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.57□□□□□ -1.68
VCPP55072 EIF2S2P4-201ENST00000461070 984 ntBASIC4.57□□□□□ -1.68
VCPP55072 AC053481.1-201ENST00000467217 306 ntBASIC4.57□□□□□ -1.68
VCPP55072 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
VCPP55072 TPT1P3-201ENST00000492841 512 ntBASIC4.57□□□□□ -1.68
VCPP55072 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.57□□□□□ -1.68
VCPP55072 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
VCPP55072 CDH12P2-201ENST00000504393 298 ntBASIC4.57□□□□□ -1.68
VCPP55072 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VCPP55072 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.57□□□□□ -1.68
VCPP55072 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.57□□□□□ -1.68
VCPP55072 RNU6-760P-201ENST00000516078 97 ntBASIC4.57□□□□□ -1.68
VCPP55072 AC067904.2-201ENST00000517322 1283 ntBASIC4.57□□□□□ -1.68
VCPP55072 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.57□□□□□ -1.68
VCPP55072 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.57□□□□□ -1.68
VCPP55072 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.57□□□□□ -1.68
VCPP55072 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.57□□□□□ -1.68
VCPP55072 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.57□□□□□ -1.68
VCPP55072 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.57□□□□□ -1.68
VCPP55072 SRGNP1-201ENST00000603392 451 ntBASIC4.57□□□□□ -1.68
VCPP55072 AC005034.4-201ENST00000603612 899 ntBASIC4.57□□□□□ -1.68
VCPP55072 AC113403.1-201ENST00000604910 193 ntBASIC4.57□□□□□ -1.68
VCPP55072 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.57□□□□□ -1.68
VCPP55072 AC009318.3-201ENST00000616916 503 ntBASIC4.57□□□□□ -1.68
VCPP55072 AC000123.2-201ENST00000623124 461 ntBASIC4.57□□□□□ -1.68
VCPP55072 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
VCPP55072 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.57□□□□□ -1.68
VCPP55072 AL158163.1-201ENST00000603915 1649 ntBASIC4.57□□□□□ -1.68
VCPP55072 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VCPP55072 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.56□□□□□ -1.68
VCPP55072 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
VCPP55072 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VCPP55072 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
VCPP55072 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VCPP55072 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
VCPP55072 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VCPP55072 MIR448-201ENST00000362131 111 ntBASIC4.56□□□□□ -1.68
VCPP55072 RNA5SP130-201ENST00000364431 114 ntBASIC4.56□□□□□ -1.68
VCPP55072 MIR421-201ENST00000365696 85 ntBASIC4.56□□□□□ -1.68
VCPP55072 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.56□□□□□ -1.68
VCPP55072 RPL21P65-201ENST00000406094 466 ntBASIC4.56□□□□□ -1.68
VCPP55072 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VCPP55072 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.56□□□□□ -1.68
VCPP55072 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.56□□□□□ -1.68
VCPP55072 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.56□□□□□ -1.68
VCPP55072 AL500522.2-201ENST00000448562 343 ntBASIC4.56□□□□□ -1.68
VCPP55072 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.56□□□□□ -1.68
VCPP55072 AC133473.1-201ENST00000455173 299 ntBASIC4.56□□□□□ -1.68
VCPP55072 RPS27AP13-201ENST00000498403 237 ntBASIC4.56□□□□□ -1.68
VCPP55072 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.56□□□□□ -1.68
VCPP55072 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.56□□□□□ -1.68
VCPP55072 CCNG2P1-201ENST00000549521 1000 ntBASIC4.56□□□□□ -1.68
VCPP55072 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.56□□□□□ -1.68
VCPP55072 AC124068.1-201ENST00000563131 678 ntBASIC4.56□□□□□ -1.68
VCPP55072 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.56□□□□□ -1.68
VCPP55072 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.56□□□□□ -1.68
VCPP55072 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.56□□□□□ -1.68
VCPP55072 MIR4716-201ENST00000579628 84 ntBASIC4.56□□□□□ -1.68
VCPP55072 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.56□□□□□ -1.68
VCPP55072 VN1R92P-201ENST00000598511 928 ntBASIC4.56□□□□□ -1.68
VCPP55072 AL451086.1-201ENST00000605596 223 ntBASIC4.56□□□□□ -1.68
VCPP55072 AL021368.1-201ENST00000607490 540 ntBASIC4.56□□□□□ -1.68
VCPP55072 AL354696.1-201ENST00000614652 497 ntBASIC4.56□□□□□ -1.68
VCPP55072 AC003001.2-201ENST00000616294 831 ntBASIC4.56□□□□□ -1.68
VCPP55072 AC012314.7-201ENST00000619693 93 ntBASIC4.56□□□□□ -1.68
VCPP55072 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms