Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SNORD65-201ENST00000391079 73 ntBASIC4.43□□□□□ -1.7
SSR1P43307 HSPE1P26-201ENST00000405341 275 ntBASIC4.43□□□□□ -1.7
SSR1P43307 RPA2P2-201ENST00000419698 796 ntBASIC4.43□□□□□ -1.7
SSR1P43307 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.43□□□□□ -1.7
SSR1P43307 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.43□□□□□ -1.7
SSR1P43307 RPS3AP54-201ENST00000435535 734 ntBASIC4.43□□□□□ -1.7
SSR1P43307 RPS7P5-201ENST00000441482 581 ntBASIC4.43□□□□□ -1.7
SSR1P43307 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.43□□□□□ -1.7
SSR1P43307 Z95152.1-201ENST00000453556 656 ntBASIC4.43□□□□□ -1.7
SSR1P43307 snoU13.1-201ENST00000459157 104 ntBASIC4.43□□□□□ -1.7
SSR1P43307 AF213884.1-201ENST00000488102 463 ntBASIC4.43□□□□□ -1.7
SSR1P43307 AC017037.1-201ENST00000508460 471 ntBASIC4.43□□□□□ -1.7
SSR1P43307 PARP4P3-201ENST00000510265 317 ntBASIC4.43□□□□□ -1.7
SSR1P43307 RNA5SP519-201ENST00000516480 119 ntBASIC4.43□□□□□ -1.7
SSR1P43307 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.43□□□□□ -1.7
SSR1P43307 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.43□□□□□ -1.7
SSR1P43307 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.43□□□□□ -1.7
SSR1P43307 UBTFL9-201ENST00000534504 1148 ntBASIC4.43□□□□□ -1.7
SSR1P43307 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.43□□□□□ -1.7
SSR1P43307 AC063950.1-201ENST00000552036 308 ntBASIC4.43□□□□□ -1.7
SSR1P43307 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.43□□□□□ -1.7
SSR1P43307 AC009268.1-201ENST00000561352 1203 ntBASIC4.43□□□□□ -1.7
SSR1P43307 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSR1P43307 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.43□□□□□ -1.7
SSR1P43307 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.43□□□□□ -1.7
SSR1P43307 AC084373.1-201ENST00000603311 235 ntBASIC4.43□□□□□ -1.7
SSR1P43307 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.43□□□□□ -1.7
SSR1P43307 AC008013.2-202ENST00000637965 364 ntBASIC4.43□□□□□ -1.7
SSR1P43307 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSR1P43307 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSR1P43307 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.43□□□□□ -1.7
SSR1P43307 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSR1P43307 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSR1P43307 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SSR1P43307 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SSR1P43307 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSR1P43307 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SSR1P43307 MIR421-201ENST00000365696 85 ntBASIC4.42□□□□□ -1.7
SSR1P43307 MIR192-201ENST00000384915 110 ntBASIC4.42□□□□□ -1.7
SSR1P43307 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.42□□□□□ -1.7
SSR1P43307 RN7SKP235-201ENST00000410662 305 ntBASIC4.42□□□□□ -1.7
SSR1P43307 AL157831.1-201ENST00000426134 473 ntBASIC4.42□□□□□ -1.7
SSR1P43307 CNOT7P1-201ENST00000429006 852 ntBASIC4.42□□□□□ -1.7
SSR1P43307 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.42□□□□□ -1.7
SSR1P43307 MTCYBP29-201ENST00000436327 1006 ntBASIC4.42□□□□□ -1.7
SSR1P43307 CYCSP43-201ENST00000438233 310 ntBASIC4.42□□□□□ -1.7
SSR1P43307 AL138878.2-201ENST00000440581 1241 ntBASIC4.42□□□□□ -1.7
SSR1P43307 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.42□□□□□ -1.7
SSR1P43307 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.42□□□□□ -1.7
SSR1P43307 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.42□□□□□ -1.7
SSR1P43307 RN7SL585P-201ENST00000470538 280 ntBASIC4.42□□□□□ -1.7
SSR1P43307 AC007686.1-201ENST00000488511 463 ntBASIC4.42□□□□□ -1.7
SSR1P43307 AC231760.1-201ENST00000498002 260 ntBASIC4.42□□□□□ -1.7
SSR1P43307 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.42□□□□□ -1.7
SSR1P43307 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SSR1P43307 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.42□□□□□ -1.7
SSR1P43307 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.42□□□□□ -1.7
SSR1P43307 NPM1P47-201ENST00000560843 856 ntBASIC4.42□□□□□ -1.7
SSR1P43307 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.42□□□□□ -1.7
SSR1P43307 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.42□□□□□ -1.7
SSR1P43307 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.42□□□□□ -1.7
SSR1P43307 MTCO2P22-201ENST00000603246 681 ntBASIC4.42□□□□□ -1.7
SSR1P43307 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.42□□□□□ -1.7
SSR1P43307 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.42□□□□□ -1.7
SSR1P43307 AC092653.1-201ENST00000608509 531 ntBASIC4.42□□□□□ -1.7
SSR1P43307 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.42□□□□□ -1.7
SSR1P43307 MIR7702-201ENST00000621931 59 ntBASIC4.42□□□□□ -1.7
SSR1P43307 AL139254.3-201ENST00000641097 674 ntBASIC4.42□□□□□ -1.7
SSR1P43307 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SSR1P43307 EIF2AP4-201ENST00000424793 1781 ntBASIC4.42□□□□□ -1.7
SSR1P43307 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.41□□□□□ -1.7
SSR1P43307 AL592494.2-201ENST00000425455 1548 ntBASIC4.41□□□□□ -1.7
SSR1P43307 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.41□□□□□ -1.7
SSR1P43307 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSR1P43307 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSR1P43307 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.41□□□□□ -1.7
SSR1P43307 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.41□□□□□ -1.7
SSR1P43307 ST13P16-201ENST00000401760 781 ntBASIC4.41□□□□□ -1.7
SSR1P43307 HMGB1P13-201ENST00000406019 642 ntBASIC4.41□□□□□ -1.7
SSR1P43307 AP000357.1-201ENST00000409926 1165 ntBASIC4.41□□□□□ -1.7
SSR1P43307 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSR1P43307 RPL23AP46-201ENST00000438548 490 ntBASIC4.41□□□□□ -1.7
SSR1P43307 XKRYP6-201ENST00000440468 1116 ntBASIC4.41□□□□□ -1.7
SSR1P43307 AC009263.1-201ENST00000441193 1239 ntBASIC4.41□□□□□ -1.7
SSR1P43307 XKRYP3-201ENST00000442113 1116 ntBASIC4.41□□□□□ -1.7
SSR1P43307 AC245517.2-201ENST00000442890 346 ntBASIC4.41□□□□□ -1.7
SSR1P43307 AL353898.1-201ENST00000444055 238 ntBASIC4.41□□□□□ -1.7
SSR1P43307 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.41□□□□□ -1.7
SSR1P43307 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.41□□□□□ -1.7
SSR1P43307 AC104629.2-201ENST00000468627 598 ntBASIC4.41□□□□□ -1.7
SSR1P43307 AP000893.1-201ENST00000474462 794 ntBASIC4.41□□□□□ -1.7
SSR1P43307 STRADBP1-201ENST00000478954 1281 ntBASIC4.41□□□□□ -1.7
SSR1P43307 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.41□□□□□ -1.7
SSR1P43307 OR5H4P-201ENST00000510851 923 ntBASIC4.41□□□□□ -1.7
SSR1P43307 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.41□□□□□ -1.7
SSR1P43307 AC023141.12-201ENST00000512399 199 ntBASIC4.41□□□□□ -1.7
SSR1P43307 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.41□□□□□ -1.7
SSR1P43307 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.41□□□□□ -1.7
SSR1P43307 AP001542.1-201ENST00000591314 200 ntBASIC4.41□□□□□ -1.7
SSR1P43307 AP003117.2-201ENST00000606010 545 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms