Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.04□□□□□ -1.6
USP6P35125 RNU4-18P-201ENST00000516751 149 ntBASIC5.04□□□□□ -1.6
USP6P35125 FTH1P11-201ENST00000517577 551 ntBASIC5.04□□□□□ -1.6
USP6P35125 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.04□□□□□ -1.6
USP6P35125 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.04□□□□□ -1.6
USP6P35125 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.04□□□□□ -1.6
USP6P35125 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.04□□□□□ -1.6
USP6P35125 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.04□□□□□ -1.6
USP6P35125 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.04□□□□□ -1.6
USP6P35125 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.04□□□□□ -1.6
USP6P35125 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP6P35125 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
USP6P35125 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
USP6P35125 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP6P35125 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP6P35125 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP6P35125 AL365440.1-201ENST00000436135 2167 ntBASIC5.03□□□□□ -1.6
USP6P35125 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP6P35125 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP6P35125 AC096664.2-201ENST00000411843 406 ntBASIC5.03□□□□□ -1.6
USP6P35125 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.03□□□□□ -1.6
USP6P35125 RPL12P18-201ENST00000437175 325 ntBASIC5.03□□□□□ -1.6
USP6P35125 EIF4A1P11-201ENST00000451239 222 ntBASIC5.03□□□□□ -1.6
USP6P35125 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
USP6P35125 AC098799.1-201ENST00000504752 800 ntBASIC5.03□□□□□ -1.6
USP6P35125 SNORD116-30-201ENST00000516468 85 ntBASIC5.03□□□□□ -1.6
USP6P35125 RN7SKP57-201ENST00000517248 293 ntBASIC5.03□□□□□ -1.6
USP6P35125 KCTD9P6-201ENST00000522306 950 ntBASIC5.03□□□□□ -1.6
USP6P35125 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.03□□□□□ -1.6
USP6P35125 AC008011.1-201ENST00000545989 227 ntBASIC5.03□□□□□ -1.6
USP6P35125 AC027807.1-201ENST00000559921 996 ntBASIC5.03□□□□□ -1.6
USP6P35125 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.03□□□□□ -1.6
USP6P35125 AC022146.1-201ENST00000595307 847 ntBASIC5.03□□□□□ -1.6
USP6P35125 AC015722.2-201ENST00000622210 551 ntBASIC5.03□□□□□ -1.6
USP6P35125 AC024023.1-201ENST00000624530 922 ntBASIC5.03□□□□□ -1.6
USP6P35125 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.03□□□□□ -1.6
USP6P35125 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.03□□□□□ -1.6
USP6P35125 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP6P35125 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.03□□□□□ -1.6
USP6P35125 CDY11P-201ENST00000447168 1651 ntBASIC5.03□□□□□ -1.6
USP6P35125 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP6P35125 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP6P35125 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.02□□□□□ -1.61
USP6P35125 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP6P35125 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP6P35125 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.02□□□□□ -1.61
USP6P35125 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP6P35125 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.02□□□□□ -1.61
USP6P35125 RN7SKP199-201ENST00000410325 305 ntBASIC5.02□□□□□ -1.61
USP6P35125 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.02□□□□□ -1.61
USP6P35125 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP6P35125 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.02□□□□□ -1.61
USP6P35125 HSPE1P16-201ENST00000426640 348 ntBASIC5.02□□□□□ -1.61
USP6P35125 AC097713.2-201ENST00000430199 356 ntBASIC5.02□□□□□ -1.61
USP6P35125 AC073063.1-201ENST00000434352 607 ntBASIC5.02□□□□□ -1.61
USP6P35125 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP6P35125 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.02□□□□□ -1.61
USP6P35125 RN7SL601P-201ENST00000471221 293 ntBASIC5.02□□□□□ -1.61
USP6P35125 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.02□□□□□ -1.61
USP6P35125 TCP11X3P-202ENST00000514289 1254 ntBASIC5.02□□□□□ -1.61
USP6P35125 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.02□□□□□ -1.61
USP6P35125 AC103843.2-201ENST00000530523 682 ntBASIC5.02□□□□□ -1.61
USP6P35125 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.02□□□□□ -1.61
USP6P35125 GTF2IP8-201ENST00000560687 584 ntBASIC5.02□□□□□ -1.61
USP6P35125 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.02□□□□□ -1.61
USP6P35125 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
USP6P35125 AC128687.2-201ENST00000609657 566 ntBASIC5.02□□□□□ -1.61
USP6P35125 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
USP6P35125 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
USP6P35125 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.02□□□□□ -1.61
USP6P35125 AC011266.1-201ENST00000624119 3569 ntBASIC5.02□□□□□ -1.61
USP6P35125 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP6P35125 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP6P35125 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.01□□□□□ -1.61
USP6P35125 ZNF833P-201ENST00000424938 1494 ntBASIC5.01□□□□□ -1.61
USP6P35125 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.01□□□□□ -1.61
USP6P35125 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
USP6P35125 AC234772.1-201ENST00000377927 937 ntBASIC5.01□□□□□ -1.61
USP6P35125 AL391219.1-201ENST00000422570 483 ntBASIC5.01□□□□□ -1.61
USP6P35125 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.01□□□□□ -1.61
USP6P35125 RPL21P110-201ENST00000433345 446 ntBASIC5.01□□□□□ -1.61
USP6P35125 UBE2V2P1-201ENST00000434717 398 ntBASIC5.01□□□□□ -1.61
USP6P35125 TPTE2P3-201ENST00000441562 1189 ntBASIC5.01□□□□□ -1.61
USP6P35125 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.01□□□□□ -1.61
USP6P35125 RPL6P9-201ENST00000466502 859 ntBASIC5.01□□□□□ -1.61
USP6P35125 TRBV8-1-201ENST00000481590 279 ntBASIC5.01□□□□□ -1.61
USP6P35125 AC012123.2-201ENST00000485809 248 ntBASIC5.01□□□□□ -1.61
USP6P35125 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.01□□□□□ -1.61
USP6P35125 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.01□□□□□ -1.61
USP6P35125 RNU1-103P-201ENST00000516502 125 ntBASIC5.01□□□□□ -1.61
USP6P35125 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.01□□□□□ -1.61
USP6P35125 AC008676.3-201ENST00000521237 435 ntBASIC5.01□□□□□ -1.61
USP6P35125 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.01□□□□□ -1.61
USP6P35125 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USP6P35125 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.01□□□□□ -1.61
USP6P35125 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.01□□□□□ -1.61
USP6P35125 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.01□□□□□ -1.61
USP6P35125 AL133247.2-201ENST00000603236 482 ntBASIC5.01□□□□□ -1.61
USP6P35125 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
USP6P35125 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms