Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 SNORA11-201ENST00000408789 128 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 RN7SKP159-201ENST00000410657 292 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 RPS26P47-201ENST00000427219 348 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC4P09017 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC4P09017 MTCYBP29-201ENST00000436327 1006 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 CDC27P1-201ENST00000445384 715 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 RPS11P1-201ENST00000451072 473 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXC4P09017 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC4P09017 NPM1P41-201ENST00000512920 831 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 VTA1P2-201ENST00000520205 911 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC4P09017 OR5M7P-201ENST00000526140 972 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC4P09017 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXC4P09017 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC4P09017 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXC4P09017 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXC4P09017 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXC4P09017 TMF1P1-201ENST00000576058 373 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 AC006130.2-201ENST00000586202 326 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXC4P09017 AL451044.1-201ENST00000604867 238 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC4P09017 MIR4727-201ENST00000622232 55 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 AL118508.4-201ENST00000624142 1176 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 AC016588.2-201ENST00000632484 3021 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC4P09017 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC4P09017 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC4P09017 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC4P09017 AC009313.2-201ENST00000417893 1941 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC4P09017 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC4P09017 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HOXC4P09017 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC4P09017 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HOXC4P09017 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXC4P09017 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC4P09017 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC4P09017 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC4P09017 AL133412.1-201ENST00000380194 2992 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC4P09017 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HOXC4P09017 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC4P09017 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC4P09017 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC4P09017 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC4P09017 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXC4P09017 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC4P09017 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC4P09017 AC025750.1-201ENST00000399891 379 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 MIR1251-201ENST00000408552 70 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 SNORA3C-201ENST00000408792 125 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 GSTM3P2-201ENST00000412746 530 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC4P09017 FAM204CP-201ENST00000424489 642 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 NANOGP6-201ENST00000429190 847 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 TRIM60P13-201ENST00000432350 1283 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC4P09017 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXC4P09017 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC4P09017 MAPRE1P3-201ENST00000435438 796 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC4P09017 HLA-N-201ENST00000437516 135 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 AC122718.1-201ENST00000439448 744 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXC4P09017 RRM2P4-201ENST00000441721 562 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXC4P09017 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXC4P09017 EIF4A1P11-201ENST00000451239 222 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 FAM133DP-201ENST00000464802 691 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 AC091959.2-201ENST00000477363 321 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 AC146944.2-203ENST00000502493 354 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC4P09017 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.94□□□□□ -1.78
HOXC4P09017 AC139495.1-202ENST00000513164 354 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.94□□□□□ -1.78
HOXC4P09017 NDUFA5P2-201ENST00000519723 344 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC4P09017 AP003168.1-201ENST00000530091 307 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC4P09017 AC120057.2-201ENST00000571520 271 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC4P09017 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC4P09017 AC009303.3-201ENST00000591103 736 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 BMS1P7-201ENST00000602440 1052 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.94□□□□□ -1.78
HOXC4P09017 AL162574.2-201ENST00000614618 657 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 AC004825.2-201ENST00000616634 455 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 AC145207.9-201ENST00000623802 325 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC4P09017 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms