Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 AC099654.8-201ENST00000637757 681 ntBASIC4.05□□□□□ -1.76
HOXD4P09016 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD4P09016 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD4P09016 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HOXD4P09016 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HOXD4P09016 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD4P09016 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HOXD4P09016 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD4P09016 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD4P09016 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD4P09016 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
HOXD4P09016 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HOXD4P09016 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD4P09016 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD4P09016 PNPT1P2-201ENST00000456768 2050 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD4P09016 AC093311.1-201ENST00000506586 2021 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 AL627171.1-201ENST00000618845 1308 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HOXD4P09016 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HOXD4P09016 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD4P09016 RAD1P1-201ENST00000231383 813 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HOXD4P09016 OR5P1P-201ENST00000299512 925 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 OR56B2P-201ENST00000317102 954 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 RNU1-85P-201ENST00000364127 164 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 RNU1-64P-201ENST00000365443 163 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD4P09016 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HOXD4P09016 RNU6-31P-201ENST00000384388 108 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 MIR320B1-201ENST00000390209 79 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 SNORA48.7-201ENST00000391302 135 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD4P09016 TAF9BP2-201ENST00000400856 499 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD4P09016 AL158073.1-201ENST00000426848 1104 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 RPS12P10-201ENST00000427031 377 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD4P09016 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXD4P09016 AC122718.1-201ENST00000439448 744 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 ACTR3P2-201ENST00000439585 1257 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 RPL23AP93-201ENST00000440847 484 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXD4P09016 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXD4P09016 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD4P09016 RN7SL98P-201ENST00000462271 300 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 FAM133DP-201ENST00000464802 691 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD4P09016 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD4P09016 HAUS1P3-201ENST00000523909 662 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD4P09016 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HOXD4P09016 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD4P09016 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD4P09016 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD4P09016 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.04□□□□□ -1.76
HOXD4P09016 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD4P09016 AC025918.2-201ENST00000558683 763 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD4P09016 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD4P09016 AP001160.4-201ENST00000596971 382 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD4P09016 BNIP3P33-201ENST00000598912 569 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 AL050303.3-201ENST00000613704 284 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD4P09016 AC091046.2-201ENST00000620775 665 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD4P09016 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD4P09016 LINC00622-201ENST00000562811 1570 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 AC090017.1-201ENST00000548612 1779 ntBASIC4.04□□□□□ -1.76
HOXD4P09016 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD4P09016 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
HOXD4P09016 AL391684.1-202ENST00000641293 1636 ntBASIC4.03□□□□□ -1.76
HOXD4P09016 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD4P09016 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD4P09016 RNU6-1257P-201ENST00000384625 110 ntBASIC4.03□□□□□ -1.76
HOXD4P09016 MIR3074-201ENST00000384885 81 ntBASIC4.03□□□□□ -1.76
HOXD4P09016 AC093719.1-202ENST00000392735 373 ntBASIC4.03□□□□□ -1.76
HOXD4P09016 RPS26P8-201ENST00000393490 348 ntBASIC4.03□□□□□ -1.76
HOXD4P09016 AL080315.1-201ENST00000406055 466 ntBASIC4.03□□□□□ -1.76
HOXD4P09016 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD4P09016 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXD4P09016 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXD4P09016 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.03□□□□□ -1.76
HOXD4P09016 VN1R42P-201ENST00000424651 344 ntBASIC4.03□□□□□ -1.76
HOXD4P09016 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD4P09016 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXD4P09016 PHBP16-201ENST00000446318 950 ntBASIC4.03□□□□□ -1.76
HOXD4P09016 AL096829.2-201ENST00000446582 742 ntBASIC4.03□□□□□ -1.76
HOXD4P09016 AC114755.5-201ENST00000447760 831 ntBASIC4.03□□□□□ -1.76
HOXD4P09016 AC012671.1-201ENST00000451912 203 ntBASIC4.03□□□□□ -1.76
HOXD4P09016 AC092691.2-201ENST00000461787 803 ntBASIC4.03□□□□□ -1.76
HOXD4P09016 RPL21P126-201ENST00000470049 478 ntBASIC4.03□□□□□ -1.76
HOXD4P09016 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD4P09016 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXD4P09016 AC112518.2-201ENST00000508565 425 ntBASIC4.03□□□□□ -1.76
HOXD4P09016 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.03□□□□□ -1.76
HOXD4P09016 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD4P09016 RNU5A-7P-201ENST00000515979 116 ntBASIC4.03□□□□□ -1.76
HOXD4P09016 SNORA31.9-201ENST00000516429 84 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms