Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC063943.1-201ENST00000465434 453 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.38□□□□□ -1.71
NKX2-2O95096 AP000893.1-201ENST00000474462 794 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-2O95096 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-2O95096 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX2-2O95096 BOLA3P3-201ENST00000505182 232 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 AC025674.1-201ENST00000507074 324 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX2-2O95096 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX2-2O95096 AC093755.1-201ENST00000512950 1023 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-2O95096 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-2O95096 AP001922.4-201ENST00000526967 290 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 AP001880.2-201ENST00000538233 448 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX2-2O95096 PCNPP1-201ENST00000552501 511 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-2O95096 EIF5A2P1-201ENST00000564027 460 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 OR1F2P-201ENST00000570470 933 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 AC022662.1-201ENST00000580252 331 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 MIR3667-201ENST00000581025 74 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 AC007349.4-201ENST00000608114 532 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 AC087683.2-201ENST00000611384 326 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 AC107075.1-201ENST00000613695 314 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 AL512506.2-201ENST00000624472 458 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 CASC19-222ENST00000641321 1173 ntBASIC4.38□□□□□ -1.71
NKX2-2O95096 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NKX2-2O95096 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-2O95096 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-2O95096 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
NKX2-2O95096 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-2O95096 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-2O95096 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NKX2-2O95096 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NKX2-2O95096 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-2O95096 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-2O95096 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-2O95096 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-2O95096 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.38□□□□□ -1.71
NKX2-2O95096 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-2O95096 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-2O95096 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-2O95096 SDAD1P1-202ENST00000524156 2051 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-2O95096 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-2O95096 Z99496.1-201ENST00000469424 1477 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-2O95096 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-2O95096 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-2O95096 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
NKX2-2O95096 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-2O95096 MAPK10-263ENST00000641052 4307 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-2O95096 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX2-2O95096 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NKX2-2O95096 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NKX2-2O95096 RNU6-115P-201ENST00000364310 107 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 RNU6-1300P-201ENST00000391046 108 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AL359643.1-201ENST00000404109 423 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AL078604.1-201ENST00000404609 466 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 MTCO3P31-201ENST00000405526 789 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AL080315.1-201ENST00000406055 466 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 FCF1P5-201ENST00000406490 482 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AL591848.1-201ENST00000413092 322 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 IFNNP1-201ENST00000429219 553 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-2O95096 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.37□□□□□ -1.71
NKX2-2O95096 RPS27P18-201ENST00000431701 247 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-2O95096 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-2O95096 AC093155.1-201ENST00000440164 826 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 RPS26P2-201ENST00000440331 348 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AL591719.1-201ENST00000444669 744 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-2O95096 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX2-2O95096 AL139824.2-201ENST00000458731 1095 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AC090142.1-201ENST00000465776 462 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX2-2O95096 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX2-2O95096 AC098862.1-201ENST00000504991 413 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.37□□□□□ -1.71
NKX2-2O95096 AC026407.1-201ENST00000518369 204 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.37□□□□□ -1.71
NKX2-2O95096 AC087808.1-201ENST00000520501 361 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.37□□□□□ -1.71
NKX2-2O95096 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.37□□□□□ -1.71
NKX2-2O95096 AC068446.3-201ENST00000555285 382 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-2O95096 AC079075.1-201ENST00000559543 878 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AC009097.3-201ENST00000563557 1018 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AGGF1P6-201ENST00000569213 976 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.37□□□□□ -1.71
NKX2-2O95096 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-2O95096 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.37□□□□□ -1.71
NKX2-2O95096 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.37□□□□□ -1.71
NKX2-2O95096 MIR4737-201ENST00000583979 81 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms