Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC006427.1-201ENST00000514359 712 ntBASIC5.1□□□□□ -1.59
VPS4BO75351 AL671862.1-201ENST00000515851 349 ntBASIC5.1□□□□□ -1.59
VPS4BO75351 AC008562.1-201ENST00000521763 330 ntBASIC5.1□□□□□ -1.59
VPS4BO75351 COX6B1P6-201ENST00000522347 255 ntBASIC5.1□□□□□ -1.59
VPS4BO75351 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS4BO75351 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS4BO75351 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS4BO75351 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS4BO75351 LSM3P2-201ENST00000551246 273 ntBASIC5.1□□□□□ -1.59
VPS4BO75351 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS4BO75351 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS4BO75351 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS4BO75351 AC006539.2-201ENST00000601729 572 ntBASIC5.1□□□□□ -1.59
VPS4BO75351 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.1□□□□□ -1.59
VPS4BO75351 AL137072.1-201ENST00000603444 466 ntBASIC5.1□□□□□ -1.59
VPS4BO75351 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS4BO75351 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.1□□□□□ -1.59
VPS4BO75351 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
VPS4BO75351 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.1□□□□□ -1.59
VPS4BO75351 AC011447.7-201ENST00000624228 1590 ntBASIC5.1□□□□□ -1.59
VPS4BO75351 AC074101.1-201ENST00000637861 241 ntBASIC5.1□□□□□ -1.59
VPS4BO75351 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
VPS4BO75351 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
VPS4BO75351 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS4BO75351 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS4BO75351 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4BO75351 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4BO75351 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4BO75351 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4BO75351 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4BO75351 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS4BO75351 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4BO75351 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4BO75351 KARSP3-201ENST00000571212 1504 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
VPS4BO75351 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS4BO75351 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4BO75351 PCAT14-202ENST00000627127 3935 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 RNU6-500P-201ENST00000362349 107 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4BO75351 SNORA67-201ENST00000384423 137 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4BO75351 FAR2P2-201ENST00000413041 594 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS4BO75351 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4BO75351 FAR2P4-202ENST00000425399 584 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS4BO75351 AC009238.2-201ENST00000431026 355 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 AL050321.1-201ENST00000432363 400 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4BO75351 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4BO75351 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS4BO75351 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS4BO75351 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS4BO75351 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS4BO75351 RPL21P6-201ENST00000479171 504 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 RPS6P4-201ENST00000494693 758 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 AC092045.1-201ENST00000495716 1231 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 AC023424.1-201ENST00000496058 459 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
VPS4BO75351 AC048346.1-201ENST00000510247 144 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4BO75351 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4BO75351 MTND3P5-201ENST00000512798 333 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4BO75351 RPL12P22-201ENST00000519073 490 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4BO75351 IGKV2-36-201ENST00000519999 223 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4BO75351 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS4BO75351 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4BO75351 AC011260.1-201ENST00000578420 472 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4BO75351 AC011840.5-201ENST00000582125 771 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 MIR4480-201ENST00000582492 71 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 AC119751.7-201ENST00000600494 245 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
VPS4BO75351 AC112220.3-201ENST00000605502 502 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4BO75351 MIR6810-201ENST00000622701 70 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 AL353662.3-201ENST00000625131 237 ntBASIC5.09□□□□□ -1.59
VPS4BO75351 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4BO75351 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
VPS4BO75351 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VPS4BO75351 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS4BO75351 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
VPS4BO75351 DBF4P1-201ENST00000412976 1892 ntBASIC5.09□□□□□ -1.6
VPS4BO75351 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
VPS4BO75351 AC100778.3-201ENST00000580060 1750 ntBASIC5.09□□□□□ -1.6
VPS4BO75351 AC119744.1-201ENST00000454746 1715 ntBASIC5.09□□□□□ -1.6
VPS4BO75351 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
VPS4BO75351 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS4BO75351 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS4BO75351 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS4BO75351 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS4BO75351 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS4BO75351 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VPS4BO75351 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS4BO75351 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms