Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RN7SL585P-201ENST00000470538 280 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 AC010683.1-201ENST00000473673 378 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM1O00151 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM1O00151 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM1O00151 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM1O00151 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM1O00151 AC021146.1-201ENST00000511202 716 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM1O00151 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.13□□□□□ -1.75
PDLIM1O00151 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM1O00151 PDCL2P2-201ENST00000533651 189 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM1O00151 AC119501.1-201ENST00000603646 475 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 RPL21P136-201ENST00000605378 396 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM1O00151 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM1O00151 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM1O00151 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM1O00151 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM1O00151 CFTRP2-201ENST00000634304 199 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PDLIM1O00151 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
PDLIM1O00151 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM1O00151 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM1O00151 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM1O00151 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM1O00151 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM1O00151 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PDLIM1O00151 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PDLIM1O00151 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM1O00151 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM1O00151 Y_RNA.110-201ENST00000363220 99 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM1O00151 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PDLIM1O00151 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
PDLIM1O00151 SNORA74C-2-201ENST00000411179 201 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM1O00151 AL035458.1-201ENST00000433096 585 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.12□□□□□ -1.75
PDLIM1O00151 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM1O00151 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.12□□□□□ -1.75
PDLIM1O00151 AC087385.1-201ENST00000475062 312 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 AC104763.1-201ENST00000475274 360 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 RPL12P20-201ENST00000475538 479 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 RPL23AP73-201ENST00000492507 471 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM1O00151 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM1O00151 RNU6-1102P-201ENST00000516149 96 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 SNORA76.2-201ENST00000517095 137 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 MTND2P7-201ENST00000521337 640 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PDLIM1O00151 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.12□□□□□ -1.75
PDLIM1O00151 AC079148.1-201ENST00000565944 819 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM1O00151 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.12□□□□□ -1.75
PDLIM1O00151 AC234771.5-201ENST00000600161 514 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 ZNF92P2-201ENST00000600543 1059 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 AL592436.1-201ENST00000605135 558 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM1O00151 AC016957.2-201ENST00000616998 848 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 AL445493.3-201ENST00000619568 477 ntBASIC4.12□□□□□ -1.75
PDLIM1O00151 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.12□□□□□ -1.75
PDLIM1O00151 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM1O00151 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM1O00151 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
PDLIM1O00151 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PDLIM1O00151 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM1O00151 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM1O00151 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
PDLIM1O00151 AL136964.1-201ENST00000622038 2990 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PDLIM1O00151 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PDLIM1O00151 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM1O00151 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM1O00151 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM1O00151 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PDLIM1O00151 U1.1-201ENST00000384101 164 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 RNA5SP397-201ENST00000391323 118 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 HMGB1P13-201ENST00000406019 642 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 RPL31P52-201ENST00000407532 367 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 MTCO3P4-201ENST00000419236 787 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 AL138785.1-201ENST00000425821 331 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 IFNNP1-201ENST00000429219 553 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 YWHAZP2-201ENST00000440317 728 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.11□□□□□ -1.75
PDLIM1O00151 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.11□□□□□ -1.75
PDLIM1O00151 CEACAMP6-201ENST00000452007 574 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 HMGN2P7-201ENST00000456186 273 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.11□□□□□ -1.75
PDLIM1O00151 RPS29P33-201ENST00000456717 146 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 RN7SL93P-201ENST00000463035 293 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 RPL23AP62-201ENST00000463396 453 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 RN7SL738P-201ENST00000470264 297 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 NPM1P17-201ENST00000479221 602 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.11□□□□□ -1.75
PDLIM1O00151 AC008628.1-201ENST00000508663 265 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.11□□□□□ -1.75
PDLIM1O00151 SNORA31.13-201ENST00000516624 135 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms