Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC017007.4-201ENST00000503353 1352 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CTNNA3Q9UI47 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.9□□□□□ -1.62
CTNNA3Q9UI47 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.9□□□□□ -1.62
CTNNA3Q9UI47 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 RNU1-13P-201ENST00000384499 162 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 ENSAP1-201ENST00000392855 326 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AP000357.1-201ENST00000409926 1165 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 PGBD4P8-201ENST00000412993 562 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 TRGV6-201ENST00000417928 299 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 MRPL50P1-201ENST00000431951 384 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 OR4C10P-201ENST00000434991 931 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AL157884.3-201ENST00000448273 1184 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 NDUFS5P3-201ENST00000450668 321 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 HMGB3P21-201ENST00000452483 547 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 C1DP3-201ENST00000455013 423 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 RPL38P1-201ENST00000460914 211 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 SYT14P1-201ENST00000481459 721 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AC005912.1-201ENST00000495392 255 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 HPRT1P2-201ENST00000505250 544 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 MTND4LP31-201ENST00000514859 294 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 SNORD116-26-201ENST00000516006 96 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 RNU7-143P-201ENST00000516781 65 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AL360157.1-201ENST00000565962 87 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 RN7SL600P-201ENST00000581811 299 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AC090246.1-201ENST00000616499 426 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 MIR7151-201ENST00000617477 60 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 AL627171.1-201ENST00000618845 1308 ntBASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.9□□□□□ -1.63
CTNNA3Q9UI47 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 AC027287.1-201ENST00000553115 1453 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 SNORA62.3-201ENST00000365110 153 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 AC240504.1-201ENST00000395709 845 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 PPIAP31-201ENST00000405422 495 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 ZNF603P-201ENST00000405613 487 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 RNA5SP317-201ENST00000410176 116 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 RNA5SP311-201ENST00000411290 116 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 AL392003.1-201ENST00000434394 243 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 RPL31P20-201ENST00000449593 360 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 RPL23AP71-201ENST00000470966 469 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 RN7SL271P-201ENST00000487601 295 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 RNA5SP315-201ENST00000516340 116 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 RNA5SP312-201ENST00000517068 116 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 AC007423.1-201ENST00000605009 627 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 AL591034.3-201ENST00000605511 685 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 AC099676.1-201ENST00000608886 657 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 AL096803.3-201ENST00000609032 532 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 AC117490.2-201ENST00000610042 594 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 AC006133.1-201ENST00000617106 264 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 AC090506.2-201ENST00000624521 419 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 FAM35DP-201ENST00000323387 2712 ntBASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
CTNNA3Q9UI47 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.88□□□□□ -1.63
CTNNA3Q9UI47 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNA3Q9UI47 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNA3Q9UI47 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNA3Q9UI47 OR11H4-201ENST00000315409 1082 ntBASIC4.88□□□□□ -1.63
CTNNA3Q9UI47 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CTNNA3Q9UI47 MIR554-201ENST00000384874 96 ntBASIC4.88□□□□□ -1.63
CTNNA3Q9UI47 RPL7P4-203ENST00000430239 730 ntBASIC4.88□□□□□ -1.63
CTNNA3Q9UI47 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms