Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 OR4H6P-202ENST00000603819 340 ntBASIC4.46□□□□□ -1.7
HPS4Q9NQG7 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.46□□□□□ -1.7
HPS4Q9NQG7 uc_338.9-201ENST00000617424 182 ntBASIC4.46□□□□□ -1.7
HPS4Q9NQG7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.46□□□□□ -1.7
HPS4Q9NQG7 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.46□□□□□ -1.7
HPS4Q9NQG7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.46□□□□□ -1.7
HPS4Q9NQG7 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.46□□□□□ -1.7
HPS4Q9NQG7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HPS4Q9NQG7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HPS4Q9NQG7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
HPS4Q9NQG7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HPS4Q9NQG7 AC012020.1-201ENST00000624541 1728 ntBASIC4.46□□□□□ -1.7
HPS4Q9NQG7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.46□□□□□ -1.7
HPS4Q9NQG7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.46□□□□□ -1.7
HPS4Q9NQG7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HPS4Q9NQG7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HPS4Q9NQG7 AL122126.1-201ENST00000546905 1318 ntBASIC4.46□□□□□ -1.7
HPS4Q9NQG7 AC011266.1-201ENST00000624119 3569 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AC134882.1-201ENST00000603738 1676 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AC025125.1-201ENST00000624743 1922 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 RNU1-14P-201ENST00000362759 152 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 LAP3P1-201ENST00000403648 294 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AL121834.1-202ENST00000404494 277 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AL445189.1-201ENST00000405722 338 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 RNA5SP36-201ENST00000410197 133 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 RN7SKP235-201ENST00000410662 305 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AC073464.3-201ENST00000422564 712 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AL117339.2-201ENST00000430475 180 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 HMGB1P26-201ENST00000452520 628 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 RPL7P48-201ENST00000461513 746 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AC091153.1-201ENST00000466297 402 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 RPS26P28-201ENST00000470806 348 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 RNA5SP446-201ENST00000515955 82 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 MYL12AP1-201ENST00000518490 515 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 HAUS1P3-201ENST00000523909 662 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 MTND6P33-201ENST00000571794 183 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AC110743.1-201ENST00000584870 478 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AC015849.2-201ENST00000605738 409 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AC099676.1-201ENST00000608886 657 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AL021997.2-201ENST00000615674 271 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AP004607.9-201ENST00000618202 316 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AL669942.2-201ENST00000620352 697 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 MIR7154-201ENST00000620673 73 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 SAGE2P-201ENST00000420011 2126 ntBASIC4.45□□□□□ -1.7
HPS4Q9NQG7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HPS4Q9NQG7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AC090229.1-201ENST00000590983 1609 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AL353692.2-201ENST00000407054 335 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 UBE2V1P15-201ENST00000407776 448 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 RNU6-628P-201ENST00000410675 107 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 RN7SKP33-201ENST00000410942 340 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AL160275.2-201ENST00000412010 394 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 COX6B1P7-201ENST00000430845 235 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 MTCO1P52-201ENST00000433928 531 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AL512326.1-201ENST00000443050 721 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AC006326.1-201ENST00000445465 787 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AC133473.1-201ENST00000455173 299 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AC005229.2-201ENST00000456995 399 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 RPL35AP15-201ENST00000468042 339 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AC012158.1-204ENST00000483430 465 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AL132838.2-201ENST00000492041 314 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AC010374.1-201ENST00000503762 1237 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AC108064.1-201ENST00000513791 460 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms