Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MTND2P28-201ENST00000457540 1044 ntBASIC3.61□□□□□ -1.83
HMG20AQ9NP66 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.61□□□□□ -1.83
HMG20AQ9NP66 RN7SL810P-201ENST00000493031 276 ntBASIC3.61□□□□□ -1.83
HMG20AQ9NP66 AC026784.1-201ENST00000507986 352 ntBASIC3.61□□□□□ -1.83
HMG20AQ9NP66 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.61□□□□□ -1.83
HMG20AQ9NP66 IGLVIV-65-201ENST00000517313 360 ntBASIC3.61□□□□□ -1.83
HMG20AQ9NP66 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.61□□□□□ -1.83
HMG20AQ9NP66 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
HMG20AQ9NP66 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.61□□□□□ -1.83
HMG20AQ9NP66 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.61□□□□□ -1.83
HMG20AQ9NP66 AC067805.1-201ENST00000559344 470 ntBASIC3.61□□□□□ -1.83
HMG20AQ9NP66 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.61□□□□□ -1.83
HMG20AQ9NP66 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.61□□□□□ -1.83
HMG20AQ9NP66 MIR5047-201ENST00000579212 100 ntBASIC3.61□□□□□ -1.83
HMG20AQ9NP66 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
HMG20AQ9NP66 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.61□□□□□ -1.83
HMG20AQ9NP66 AC245128.3-201ENST00000594721 748 ntBASIC3.61□□□□□ -1.83
HMG20AQ9NP66 AC011492.1-201ENST00000600023 315 ntBASIC3.61□□□□□ -1.83
HMG20AQ9NP66 BRDTP1-201ENST00000605735 677 ntBASIC3.61□□□□□ -1.83
HMG20AQ9NP66 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.61□□□□□ -1.83
HMG20AQ9NP66 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.61□□□□□ -1.83
HMG20AQ9NP66 AC091905.1-201ENST00000624400 311 ntBASIC3.61□□□□□ -1.83
HMG20AQ9NP66 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
HMG20AQ9NP66 OR6C71P-202ENST00000641886 1107 ntBASIC3.61□□□□□ -1.83
HMG20AQ9NP66 OR5AC4P-202ENST00000642086 985 ntBASIC3.61□□□□□ -1.83
HMG20AQ9NP66 PHKBP1-201ENST00000450951 1951 ntBASIC3.61□□□□□ -1.83
HMG20AQ9NP66 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.61□□□□□ -1.83
HMG20AQ9NP66 AC022893.2-201ENST00000564832 3296 ntBASIC3.61□□□□□ -1.83
HMG20AQ9NP66 AL137100.1-201ENST00000556703 1620 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 RNA5SP505-201ENST00000364748 108 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 MIR1251-201ENST00000408552 70 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 RPL31P12-201ENST00000422587 358 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 USP9YP7-201ENST00000436723 430 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 RPL23AP52-201ENST00000439311 478 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 Z99127.2-201ENST00000441426 334 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 HMGB3P8-201ENST00000449709 577 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 USP9YP32-201ENST00000452432 430 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 RPL7P32-201ENST00000457119 744 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AC010468.1-201ENST00000461022 817 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 RN7SL98P-201ENST00000462271 300 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 RPS29P19-201ENST00000479709 171 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 RPS27AP16-201ENST00000492222 470 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 PCNAP1-201ENST00000505363 709 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 RNA5SP309-201ENST00000516670 106 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 RNA5SP73-201ENST00000516744 108 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AL133247.2-201ENST00000603236 482 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AC090948.1-201ENST00000607464 549 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AL713922.2-201ENST00000619384 716 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 MIR7703-201ENST00000620784 77 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AP000756.2-201ENST00000624168 2567 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AC114546.3-201ENST00000623582 1734 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HMG20AQ9NP66 EIF2AP4-201ENST00000424793 1781 ntBASIC3.6□□□□□ -1.83
HMG20AQ9NP66 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMG20AQ9NP66 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMG20AQ9NP66 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMG20AQ9NP66 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMG20AQ9NP66 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.59□□□□□ -1.83
HMG20AQ9NP66 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMG20AQ9NP66 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMG20AQ9NP66 RNU4-7P-201ENST00000364758 141 ntBASIC3.59□□□□□ -1.83
HMG20AQ9NP66 RNU6-398P-201ENST00000384143 109 ntBASIC3.59□□□□□ -1.83
HMG20AQ9NP66 MIR7-1-201ENST00000384871 110 ntBASIC3.59□□□□□ -1.83
HMG20AQ9NP66 AL583835.1-201ENST00000399570 407 ntBASIC3.59□□□□□ -1.83
HMG20AQ9NP66 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.59□□□□□ -1.83
HMG20AQ9NP66 MTCO3P31-201ENST00000405526 789 ntBASIC3.59□□□□□ -1.83
HMG20AQ9NP66 AL136131.1-201ENST00000406079 803 ntBASIC3.59□□□□□ -1.83
HMG20AQ9NP66 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.59□□□□□ -1.83
HMG20AQ9NP66 AL157831.1-201ENST00000426134 473 ntBASIC3.59□□□□□ -1.83
HMG20AQ9NP66 YY1P1-201ENST00000427625 668 ntBASIC3.59□□□□□ -1.83
HMG20AQ9NP66 RPL23AP4-201ENST00000427757 463 ntBASIC3.59□□□□□ -1.83
HMG20AQ9NP66 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMG20AQ9NP66 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.59□□□□□ -1.83
HMG20AQ9NP66 AC022022.1-201ENST00000430304 178 ntBASIC3.59□□□□□ -1.83
HMG20AQ9NP66 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.59□□□□□ -1.83
HMG20AQ9NP66 AL138878.2-201ENST00000440581 1241 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms