Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.62□□□□□ -1.51
CD248Q9HCU0 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.62□□□□□ -1.51
CD248Q9HCU0 AC015726.3-201ENST00000624501 418 ntBASIC5.62□□□□□ -1.51
CD248Q9HCU0 AC099654.5-201ENST00000636479 350 ntBASIC5.62□□□□□ -1.51
CD248Q9HCU0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
CD248Q9HCU0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.62□□□□□ -1.51
CD248Q9HCU0 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.62□□□□□ -1.51
CD248Q9HCU0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD248Q9HCU0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.62□□□□□ -1.51
CD248Q9HCU0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CD248Q9HCU0 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD248Q9HCU0 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD248Q9HCU0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD248Q9HCU0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CD248Q9HCU0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
CD248Q9HCU0 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CD248Q9HCU0 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD248Q9HCU0 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD248Q9HCU0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC005294.1-201ENST00000355509 281 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 Y_RNA.70-201ENST00000362886 110 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 Y_RNA.192-201ENST00000363977 102 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 Y_RNA.408-201ENST00000383987 102 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 RNA5SP487-201ENST00000410186 122 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 ISCA1P1-201ENST00000426679 387 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 MED14P1-201ENST00000430517 648 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 AL590103.1-201ENST00000434488 307 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 NDUFB4P8-201ENST00000435351 367 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 EEF1E1P1-201ENST00000446998 430 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 MTND5P20-201ENST00000448677 143 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 TPT1P7-201ENST00000458300 517 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 RPL21P6-201ENST00000479171 504 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 RPL7P39-201ENST00000481157 744 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC004453.1-201ENST00000487895 408 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CD248Q9HCU0 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD248Q9HCU0 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC007954.1-201ENST00000554198 494 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC004825.1-201ENST00000555068 586 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 ROCK1P1-201ENST00000573767 549 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 MIR4700-201ENST00000578311 74 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 RN7SL290P-201ENST00000578661 300 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC069545.1-201ENST00000605671 358 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 NANOGP3-201ENST00000605855 286 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 AC008945.2-201ENST00000606056 604 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 U4.5-201ENST00000617137 123 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 MTND1P37-201ENST00000636562 264 ntBASIC5.61□□□□□ -1.51
CD248Q9HCU0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD248Q9HCU0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD248Q9HCU0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.61□□□□□ -1.51
CD248Q9HCU0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD248Q9HCU0 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD248Q9HCU0 AC009313.2-201ENST00000417893 1941 ntBASIC5.6□□□□□ -1.51
CD248Q9HCU0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD248Q9HCU0 AL355852.1-201ENST00000454081 1771 ntBASIC5.6□□□□□ -1.51
CD248Q9HCU0 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.6□□□□□ -1.51
CD248Q9HCU0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD248Q9HCU0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.6□□□□□ -1.51
CD248Q9HCU0 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD248Q9HCU0 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CD248Q9HCU0 AL391994.1-201ENST00000254724 282 ntBASIC5.6□□□□□ -1.51
CD248Q9HCU0 OR56B2P-201ENST00000317102 954 ntBASIC5.6□□□□□ -1.51
CD248Q9HCU0 MIR133B-201ENST00000362210 119 ntBASIC5.6□□□□□ -1.51
CD248Q9HCU0 RNU4-21P-201ENST00000362802 126 ntBASIC5.6□□□□□ -1.51
CD248Q9HCU0 RN7SKP6-201ENST00000364795 319 ntBASIC5.6□□□□□ -1.51
CD248Q9HCU0 RNU1-136P-201ENST00000384181 164 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms