Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 Y_RNA.25-201ENST00000362528 102 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 RNU6-444P-201ENST00000383988 108 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AL021407.1-201ENST00000404531 386 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 NUDT19P3-201ENST00000404698 555 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AL035079.1-201ENST00000405210 287 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AL512422.1-201ENST00000407033 553 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 RPS15AP38-201ENST00000413110 372 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 LUZP4P1-201ENST00000415420 344 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC009302.1-201ENST00000417147 390 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC092634.6-201ENST00000418558 192 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 TIMM9P2-201ENST00000419324 266 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC099336.2-201ENST00000422457 254 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC019178.2-201ENST00000423595 505 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 COX6CP13-201ENST00000428703 226 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 CFL1P1-202ENST00000432948 411 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC241584.1-201ENST00000438469 1241 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AL589765.3-201ENST00000446084 462 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 MTND2P19-201ENST00000449129 1012 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC009961.3-201ENST00000449832 765 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 HMGN3P1-201ENST00000453847 193 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC099560.2-201ENST00000457554 255 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 NCOR1P1-202ENST00000486162 291 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC092045.1-201ENST00000495716 1231 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC104685.1-201ENST00000502445 371 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 IGKV2-18-201ENST00000522607 343 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC007954.1-201ENST00000554198 494 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 RN7SL753P-201ENST00000581238 290 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AP005262.1-201ENST00000582646 997 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 MIR3936-201ENST00000584304 110 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AP000811.1-201ENST00000603803 651 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC018695.5-201ENST00000605872 315 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC011939.3-201ENST00000613686 466 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 FP325313.1-201ENST00000638228 703 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 AC090017.1-201ENST00000548612 1779 ntBASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM54Q9BYV2 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AL034370.1-201ENST00000397254 1590 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 Y_RNA.318-201ENST00000365131 97 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 Y_RNA.560-201ENST00000384689 102 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 U3.25-201ENST00000391209 220 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 NCSTNP1-201ENST00000406229 144 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 RN7SKP16-201ENST00000410180 299 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 RN7SKP206-201ENST00000410823 293 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 VN1R108P-201ENST00000431580 830 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC010881.1-201ENST00000433830 235 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC098826.1-201ENST00000433943 471 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AL590103.1-201ENST00000434488 307 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms